Transcription factor

Q4V348 - ZNF658B

Zinc finger protein 658B

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 819 aa

114 Generated PWM 16 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)100

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M04653_2.00	NN 70-40%	CisBP	GGTACGGTTGTCCATGTTGCAA	69.3% identity		Open · Scan
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	68.2% identity		Open · Scan
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	65.8% identity		Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	64.7% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	63.5% identity		Open · Scan
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	63.5% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	63.5% identity		Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	63.5% identity		Open · Scan
M02924_2.00	NN 70-40%	CisBP	AGTGTTAACAGAACACCT	62.8% identity		Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	62.3% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	62.3% identity		Open · Scan
M08985_2.00	NN 70-40%	CisBP	TGAGGACCTACTGTGTGCC	62.0% identity		Open · Scan
MA1587.1	NN 70-40%	JASPAR	CCTCGACCTCCTGA	61.8% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	61.4% identity		Open · Scan
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	61.1% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	61.1% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	60.9% identity		Open · Scan
M04613_2.00	NN 70-40%	CisBP	CTCATGTGCTAATTACAAA	60.1% identity		Open · Scan
M07689_2.00	NN 70-40%	CisBP	ACCCAGGCTCCTTCCATCTTGTGGCTC	60.1% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	60.1% identity		Open · Scan
M08375_2.00	NN 70-40%	CisBP	TTCCCCATTGGCTACTGCACCGGTCCT	59.7% identity		Open · Scan
MA1124.1	NN 70-40%	JASPAR	CATTCATTCATTC	59.6% identity		Open · Scan
M08944_2.00	NN 70-40%	CisBP	TACCATGCTGTTTTGATTAC	59.4% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	59.3% identity		Open · Scan
M08267_2.00	NN 70-40%	CisBP	CAGTTTCATTTTCC	59.0% identity		Open · Scan
M04650_2.00	NN 70-40%	CisBP	GCATAACTGCCCCGCTGCC	58.9% identity		Open · Scan
M07686_2.00	NN 70-40%	CisBP	TAGCTTGTTTCCAGCCAC	58.9% identity		Open · Scan
M08245_2.00	NN 70-40%	CisBP	TGGTGCCTTATTCCC	58.5% identity		Open · Scan
M07700_2.00	NN 70-40%	CisBP	ATGTTGTGAGGAAGCCCA	58.4% identity		Open · Scan
M07590_2.00	NN 70-40%	CisBP	TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT	58.3% identity		Open · Scan
M07764_2.00	NN 70-40%	CisBP	CTGCACTCTCCCCTTCCCCCCCTCCCC	57.7% identity		Open · Scan
M07582_2.00	NN 70-40%	CisBP	TCCCTG	57.6% identity		Open · Scan
M07635_2.00	NN 70-40%	CisBP	AAGTTTTCTTGTATTATATCT	57.6% identity		Open · Scan
M07667_2.00	NN 70-40%	CisBP	CCGCACAGGCCCCCGGGCCCC	57.4% identity		Open · Scan
M07649_2.00	NN 70-40%	CisBP	CCCCCCCCCCCCTCAGGAATGCC	57.2% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	56.8% identity		Open · Scan
M00945_2.00	NN 70-40%	CisBP	CACCGCAC	56.3% identity		Open · Scan
M08309_2.00	NN 70-40%	CisBP	AAAAACCCCCCTGCAGAGCCCAGCCCT	56.2% identity		Open · Scan
M08395_2.00	NN 70-40%	CisBP	GCTGCCTACTCTTCC	56.2% identity		Open · Scan
M08373_2.00	NN 70-40%	CisBP	CCCCCTGGCTCTTCCTCT	56.1% identity		Open · Scan
M08347_2.00	NN 70-40%	CisBP	GCCCTGGGCAGC	55.6% identity		Open · Scan
M00134_2.00	NN 70-40%	CisBP	GCCACGCCCA	55.5% identity		Open · Scan
M08334_2.00	NN 70-40%	CisBP	TTTGTTTTTTTCTGATTGCTTTTTACTTAT	55.5% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	55.3% identity		Open · Scan
M00786_2.00	NN 70-40%	CisBP	TATATATAT	55.2% identity		Open · Scan
M04598_2.00	NN 70-40%	CisBP	CGCTAACTCTCCACA	55.1% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	54.9% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	54.9% identity		Open · Scan
MA1589.1	NN 70-40%	JASPAR	TAGGAGTGGAATTGCTGGGTC	54.9% identity		Open · Scan
M07605_2.00	NN 70-40%	CisBP	TATTTTTTTTTATTTTTTTTTTTTTTTTTT	54.7% identity		Open · Scan
M08254_2.00	NN 70-40%	CisBP	CTGCCCTGGGACTTT	54.7% identity		Open · Scan
M04465_2.00	NN 70-40%	CisBP	GTGATTCTTATCTTATCCTT	54.2% identity		Open · Scan
M07753_2.00	NN 70-40%	CisBP	TGCATTCCTTGGCTTGTG	54.0% identity		Open · Scan
M08371_2.00	NN 70-40%	CisBP	CCAGACTTGTCCTCT	53.8% identity		Open · Scan
M08860_2.00	NN 70-40%	CisBP	TCTTATAAGGGCACTAATCCCATT	53.4% identity		Open · Scan
M00645_2.00	NN 70-40%	CisBP	CGCCCACGCA	53.2% identity		Open · Scan
M07598_2.00	NN 70-40%	CisBP	CTGACAATACCAAGTGTTGAC	53.0% identity		Open · Scan
M07740_2.00	NN 70-40%	CisBP	TCCTGATTCCACACTCAAACATAACTTT	53.0% identity		Open · Scan
M08252_2.00	NN 70-40%	CisBP	CCGGCTCCAGCACCC	53.0% identity		Open · Scan
M08934_2.00	NN 70-40%	CisBP	GCTGTACCTGCTTATTAGGC	53.0% identity		Open · Scan
M02896_2.00	NN 70-40%	CisBP	TGCTTTCTAGGAATTCA	52.8% identity		Open · Scan
MA0731.1	NN 70-40%	JASPAR	TGCTTTCTAGGAATTCA	52.8% identity		Open · Scan
M01044_2.00	NN 70-40%	CisBP	TCTCTCTTTC	52.7% identity		Open · Scan
M01440_2.00	NN 70-40%	CisBP	TACGCCAC	52.7% identity		Open · Scan
M00142_2.00	NN 70-40%	CisBP	GTGCTCCT	52.5% identity		Open · Scan
M07581_2.00	NN 70-40%	CisBP	TCCCCTGTGCTTCTCTCCCCT	52.4% identity		Open · Scan
M07729_2.00	NN 70-40%	CisBP	CCAGACTGCCTGCCAAAACCCCCT	52.4% identity		Open · Scan
M07579_2.00	NN 70-40%	CisBP	CATCTCCAGGA	52.2% identity		Open · Scan
M07714_2.00	NN 70-40%	CisBP	AGCCCATTGGGGCCTATGCCC	52.0% identity		Open · Scan
M08256_2.00	NN 70-40%	CisBP	GTGCCTT	52.0% identity		Open · Scan
M08263_2.00	NN 70-40%	CisBP	ATCTCGGCACTTTGGGAGGCCA	51.8% identity		Open · Scan
M04505_2.00	NN 70-40%	CisBP	AGCTTTTCCCACAC	51.7% identity		Open · Scan
M07699_2.00	NN 70-40%	CisBP	GGTTTAT	51.7% identity		Open · Scan
M07723_2.00	NN 70-40%	CisBP	CCGCTGCTCCCTGCT	51.7% identity		Open · Scan
MA1154.1	NN 70-40%	JASPAR	CTTTCCCACAACACGAC	51.7% identity		Open · Scan
M05853_2.00	NN 70-40%	CisBP	CCACCTTTAGCCATATCT	51.4% identity		Open · Scan
M07562_2.00	NN 70-40%	CisBP	GAAAAAAAC	51.4% identity		Open · Scan
M07648_2.00	NN 70-40%	CisBP	GCTTGCAAAAAAAATTTAACTCCCAGCTC	51.4% identity		Open · Scan
M07607_2.00	NN 70-40%	CisBP	GGCTCCACG	51.3% identity		Open · Scan
M00149_2.00	NN 70-40%	CisBP	CGTACGCC	51.2% identity		Open · Scan
M08279_2.00	NN 70-40%	CisBP	CCTCCCTCC	51.2% identity		Open · Scan
M07678_2.00	NN 70-40%	CisBP	CCCGCCCCCTCCTCCCCCTTCCCACCC	50.9% identity		Open · Scan
M08292_2.00	NN 70-40%	CisBP	TGTATTCCTTGTCATGTGTGG	50.8% identity		Open · Scan
M00217_2.00	NN 70-40%	CisBP	TTACTCAATAT	50.7% identity		Open · Scan
M08390_2.00	NN 70-40%	CisBP	GCTTTGTTGACTCAC	50.7% identity		Open · Scan
M07684_2.00	NN 70-40%	CisBP	CCTGTTCTTGACTTT	50.6% identity		Open · Scan
M07761_2.00	NN 70-40%	CisBP	CTGATTATTCACCCA	50.6% identity		Open · Scan
M08342_2.00	NN 70-40%	CisBP	GCTCTGCCTCCCTCT	50.6% identity		Open · Scan
MA0528.1	NN 70-40%	JASPAR	GGAGGAGGAGGGGGAGGAGGA	50.6% identity		Open · Scan
M07720_2.00	NN 70-40%	CisBP	TGTGTGTGTGGGCATGTGTGTGTGCGAGT	50.5% identity		Open · Scan
MA1597.1	NN 70-40%	JASPAR	CCCAGGGAAGCCATTTC	50.5% identity		Open · Scan
M04536_2.00	NN 70-40%	CisBP	ACGTAACCCGATACC	50.4% identity		Open · Scan
M07593_2.00	NN 70-40%	CisBP	AGATGAAGTCACCCCTCTTAC	50.3% identity		Open · Scan
M08255_2.00	NN 70-40%	CisBP	CTCTTCCGGT	50.3% identity		Open · Scan
M07727_2.00	NN 70-40%	CisBP	CGCCGCCTCCCC	50.1% identity		Open · Scan
MA1596.1	NN 70-40%	JASPAR	GCCTCAGCCTCCCGAG	50.1% identity		Open · Scan
M04590_2.00	NN 70-40%	CisBP	TGCGCTAACCATTGC	50.0% identity		Open · Scan
M08399_2.00	NN 70-40%	CisBP	TACTCTGGGGCCACATGACTC	50.0% identity		Open · Scan
M08540_2.00	NN 70-40%	CisBP	CCCCT	50.0% identity		Open · Scan
M08914_2.00	NN 70-40%	CisBP	ATTTAGTCCATTTACATTTAATGT	50.0% identity		Open · Scan

ModCRE14

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_sp_Q4V348_Z658B_HUMAN:145:222_5keb_A_1	ModCRE	Homology model	GATCGCCGGT	Region 145-222 · 1 3D model		Open · Scan
TFS_sp_Q4V348_Z658B_HUMAN:148:247_5ei9_E_1	ModCRE	Homology model	TGGGGGGGAGTGGACCAA	Region 148-247 · 1 3D model		Open · Scan
TFS_sp_Q4V348_Z658B_HUMAN:149:222_1a1g_A_1	ModCRE	Homology model	GAATAGCCCC	Region 149-222 · 1 3D model		Open · Scan
TFS_sp_Q4V348_Z658B_HUMAN:165:222_4m9v_C_1	ModCRE	Homology model	CCTTTTGCAT	Region 165-222 · 1 3D model		Open · Scan
TFS_sp_Q4V348_Z658B_HUMAN:169:222_4gzn_C_1	ModCRE	Homology model	CCTTTTGTAA	Region 169-222 · 1 3D model		Open · Scan
TFS_sp_Q4V348_Z658B_HUMAN:16:246_5v3j_E_1	ModCRE	Homology model	GGGCTGGGAAAGGGGGGCCCCCTGT	Region 16-246 · 1 3D model		Open · Scan
TFS_sp_Q4V348_Z658B_HUMAN:16:246_5v3m_C_1	ModCRE	Homology model	TGGGTAATTAGGGCGTGCCCGGGCAC	Region 16-246 · 1 3D model		Open · Scan
TFS_sp_Q4V348_Z658B_HUMAN:16:246_5wjq_D_1	ModCRE	Homology model	CGGGAATTTTGGGGGGGCCCCGGGCC	Region 16-246 · 1 3D model		Open · Scan
TFS_sp_Q4V348_Z658B_HUMAN:177:224_5yj3_C_1	ModCRE	Homology model	CCGAA	Region 177-224 · 1 3D model		Open · Scan
TFS_sp_Q4V348_Z658B_HUMAN:333:609_5v3j_E_1	ModCRE	Homology model	TGCCGCCCCCTCCTCGGGGGGGGGCG	Region 333-609 · 1 3D model		Open · Scan
TFS_sp_Q4V348_Z658B_HUMAN:333:609_5v3m_C_1	ModCRE	Homology model	CCCCCGCCCCCAGCCCCCCCCGGCCC	Region 333-609 · 1 3D model		Open · Scan
TFS_sp_Q4V348_Z658B_HUMAN:359:637_5wjq_D_1	ModCRE	Homology model	GCGGCCCCCCGCGCCCATCCCCCGCGCG	Region 359-637 · 1 3D model		Open · Scan
TFS_sp_Q4V348_Z658B_HUMAN:651:800_2i13_A_1	ModCRE	Homology model	ATTAAGCAGAGCTGTAGGGCT	Region 651-800 · 1 3D model		Open · Scan
TFS_sp_Q4V348_Z658B_HUMAN:90:247_2i13_A_1	ModCRE	Homology model	GGGCTGCTTAGAGAATTCCTC	Region 90-247 · 1 3D model		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 819 aa

16-247

278-637

651-800

Region 16-247 10 PWM

Residues

232 aa

Domains

PF00096 · Zinc finger, C2H2 type

3D models

10 active PDBs

Templates

1A1G, 2I13, 4GZN, 4M9V, 5EI9, 5KEB, 5V3J, 5V3M, ...

Sources

Predicted = Low

Scan this region Show models

Region 278-637 3 PWM

Residues

360 aa

Domains

PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

4 active PDBs · 4 summary rows

Templates

5V3J, 5V3M, 5WJQ, 7W1M

Sources

Predicted = Low

Scan this region Show models

Region 651-800 1 PWM

Residues

150 aa

Domains

PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

2 active PDBs · 2 summary rows

Templates

1LLM, 2I13

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

16 active PDB models 6 summary rows

Region 16-24710 models

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:145:222_5keb_A_1	5keb	145-222	View model · PDB
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:148:247_5ei9_E_1	5ei9	148-247	View model · PDB
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:149:222_1a1g_A_1	1a1g	149-222	View model · PDB
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:165:222_4m9v_C_1	4m9v	165-222	View model · PDB
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:169:222_4gzn_C_1	4gzn	169-222	View model · PDB
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:16:246_5v3j_E_1	5v3j	16-246	View model · PDB
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:16:246_5v3m_C_1	5v3m	16-246	View model · PDB
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:16:246_5wjq_D_1	5wjq	16-246	View model · PDB
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:177:224_5yj3_C_1	5yj3	177-224	View model · PDB
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:90:247_2i13_A_1	2i13	90-247	View model · PDB

Region 278-6374 models · 4 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:278:576_7w1m_H_1	7w1m	278-576	View model · PDB
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:333:609_5v3j_E_1	5v3j	333-609	View model · PDB
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:333:609_5v3m_C_1	5v3m	333-609	View model · PDB
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:359:637_5wjq_D_1	5wjq	359-637	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
1	5wjq	261:809	359	637	P:D · DNA:A,B	51.3% / 69.9%	99	View · PDB TFS_sp_Q4V348_Z658B_HUMAN:359:637_5wjq_D_1
2	5v3m	261:809	333	609	P:C · DNA:A,B	50.2% / 70.4%	100	View · PDB TFS_sp_Q4V348_Z658B_HUMAN:333:609_5v3m_C_1
3	5v3j	261:809	333	609	P:E · DNA:A,B	50.2% / 70.4%	100	View · PDB TFS_sp_Q4V348_Z658B_HUMAN:333:609_5v3j_E_1
5	7w1m	261:809	278	576	P:H · DNA:F,G	36.4% / 51.0%	92	View · PDB TFS_sp_Q4V348_Z658B_HUMAN:278:576_7w1m_H_1

Region 651-8002 models · 2 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_sp_Q4V348_Z658B_HUMAN:668:719_1llm_C_1	1llm	668-719	View model · PDB
Predicted = Low	TFS_sp_Q4V348_Z658B_HUMAN:651:800_2i13_A_1	2i13	651-800	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
4	2i13	261:809	651	800	P:A · DNA:C,D	61.3% / 74.7%	97	View · PDB TFS_sp_Q4V348_Z658B_HUMAN:651:800_2i13_A_1
1	1llm	261:809	668,668	719,719	P:C,D · DNA:A,B	40.4% / 65.4%	59,61	View · PDB DIMER_sp_Q4V348_Z658B_HUMAN:668:719_1llm_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
200-222	PF00096	Zinc finger, C2H2 type	overlaps 16-247
278-300	PF00096	Zinc finger, C2H2 type	overlaps 278-637
306-328	PF00096	Zinc finger, C2H2 type	overlaps 278-637
334-356	PF00096	Zinc finger, C2H2 type	overlaps 278-637
362-384	PF00096	Zinc finger, C2H2 type	overlaps 278-637
390-412	PF00096	Zinc finger, C2H2 type	overlaps 278-637
418-440	PF00096	Zinc finger, C2H2 type	overlaps 278-637
446-468	PF00096	Zinc finger, C2H2 type	overlaps 278-637
474-496	PF00096	Zinc finger, C2H2 type	overlaps 278-637
502-524	PF00096	Zinc finger, C2H2 type	overlaps 278-637
530-552	PF00096	Zinc finger, C2H2 type	overlaps 278-637
558-580	PF00096	Zinc finger, C2H2 type	overlaps 278-637
586-608	PF00096	Zinc finger, C2H2 type	overlaps 278-637
614-636	PF00096	Zinc finger, C2H2 type	overlaps 278-637
642-663	PF00096	Zinc finger, C2H2 type	overlaps 651-800
670-692	PF00096	Zinc finger, C2H2 type	overlaps 651-800
698-720	PF00096	Zinc finger, C2H2 type	overlaps 651-800
726-748	PF00096	Zinc finger, C2H2 type	overlaps 651-800
754-776	PF00096	Zinc finger, C2H2 type	overlaps 651-800
782-805	PF00096	Zinc finger, C2H2 type	overlaps 651-800