ModCRE DB

Transcription factor

Q53EK5

T-box transcription factor TBX21 (T-cell-specific T-box transcription factor T-bet) (Transcription factor TBLYM)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 535 aa

14 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
MA0690.1 NN 70+% JASPAR AAGGTGTGAA 99.8% identity Open · Scan
M03563_2.00 NN 70+% CisBP AAGGTGTGAAAAT 70.9% identity Open · Scan
MA0800.1 NN 70+% JASPAR AAGGTGTGAAAAT 70.5% identity Open · Scan
Nearest Neighbor (70% - 40%)11
MotifPredictionSourceDNA bindingSupportLogoActions
MA0802.1 NN 70-40% JASPAR AGGTGTGAAA 66.0% identity Open · Scan
M00833_2.00 NN 70-40% CisBP AGGTGTGA 56.3% identity Open · Scan
MA0807.1 NN 70-40% JASPAR AGGTGTGA 56.3% identity Open · Scan
M02498_2.00 NN 70-40% CisBP AGGTGTCA 53.8% identity Open · Scan
M00734_2.00 NN 70-40% CisBP GAGGTGTGAA 53.5% identity Open · Scan
M03559_2.00 NN 70-40% CisBP AGGTGTGAAATTTCACACCT 53.1% identity Open · Scan
MA0806.1 NN 70-40% JASPAR AGGTGTGA 53.1% identity Open · Scan
M09427_2.00 NN 70-40% CisBP TTAGCAGGGAGGTGTGAAAT 51.3% identity Open · Scan
MA0009.1 NN 70-40% JASPAR CTAGGTGTGAA 51.3% identity Open · Scan
MA0009.2 NN 70-40% JASPAR TCACACCTAGGTGTGA 51.3% identity Open · Scan
M01030_2.00 NN 70-40% CisBP TTGACACCTC 50.4% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 535 aa
135-324

Region 135-324 0 PWM

Residues
190 aa
Domains
PF00907 · T-box
3D models
1 active PDB
Templates
6F59
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 135-3241 model
Actions
Predicted = Low TFS_Q53EK5:135:324_6f59_B_1 6f59 135-324 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
139-326PF00907T-boxoverlaps 135-324