ModCRE DB

Transcription factor

Q53F30

Aryl hydrocarbon receptor nuclear translocator isoform 2 variant

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 315 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)4
MotifPredictionSourceDNA bindingSupportLogoActions
MA0259.1 NN 70+% JASPAR GGACGTGC 99.6% identity Open · Scan
MA0004.1 NN 70+% JASPAR CACGTG 95.2% identity Open · Scan
M08746_2.00 NN 70+% CisBP GCACGTGA 90.4% identity Open · Scan
M06011_2.00 NN 70+% CisBP GCACGTGAC 73.1% identity Open · Scan
Nearest Neighbor (70% - 40%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M01720_2.00 NN 70-40% CisBP GCACATGAAT 69.4% identity Open · Scan
MA1464.1 NN 70-40% JASPAR GTCACGTGCC 69.4% identity Open · Scan
MA0603.1 NN 70-40% JASPAR GGTCACGTGC 50.2% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 315 aa
77-148

Region 77-148 0 PWM

Residues
72 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1HLO
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 77-1481 model
Actions
Predicted = Low DIMER_Q53F30:77:148_1hlo_A_1 1hlo 77-148 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
91-143PF00010Helix-loop-helix DNA-binding domainoverlaps 77-148
166-269PF00989PAS foldNo overlap with loaded model regions