ModCRE DB

Transcription factor

Q53F65

Ets transcription factor TEL-2b variant

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 341 aa

7 Generated PWM 13 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE7
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_Q53F65_Q53F65_HUMAN:209:305_3mfk_B_1 ModCRE Homology model GACCCTCCAGATGGT Region 209-305 · 1 3D model Open · Scan
DIMER_tr_Q53F65_Q53F65_HUMAN:209:305_3ri4_D_1 ModCRE Homology model AAACCATCCCGGGAG Region 209-305 · 1 3D model Open · Scan
DIMER_tr_Q53F65_Q53F65_HUMAN:226:304_5e8i_G_1 ModCRE Homology model CATTACCTTT Region 226-304 · 1 3D model Open · Scan
DIMER_tr_Q53F65_Q53F65_HUMAN:226:308_1dux_F_1 ModCRE Homology model CTAAAGGAAACTT Region 226-308 · 1 3D model Open · Scan
TFS_tr_Q53F65_Q53F65_HUMAN:226:305_2stt_A_1 ModCRE Homology model GTTCGAATCCTGTTACC Region 226-305 · 1 3D model Open · Scan
TFS_tr_Q53F65_Q53F65_HUMAN:226:305_2stw_A_1 ModCRE Homology model TGTAAAAAATTTTTTTT Region 226-305 · 1 3D model Open · Scan
TFS_tr_Q53F65_Q53F65_HUMAN:226:306_3jtg_A_1 ModCRE Homology model GGCTTTTTCCTTTTA Region 226-306 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 341 aa
209-312

Region 209-312 7 PWM

Residues
104 aa
Domains
PF00178 · Ets-domain
3D models
13 active PDBs · 10 summary rows
Templates
1DUX, 2NNY, 2STT, 2STW, 3JTG, 3MFK, 3RI4, 4MHG, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
13 active PDB models 10 summary rows
Region 209-31213 models · 10 summary rows
Actions
Predicted = Low DIMER_tr_Q53F65_Q53F65_HUMAN:209:305_2nny_B_1 2nny 209-305 View model · PDB
Predicted = Low DIMER_tr_Q53F65_Q53F65_HUMAN:209:305_3mfk_B_1 3mfk 209-305 View model · PDB
Predicted = Low DIMER_tr_Q53F65_Q53F65_HUMAN:209:305_3ri4_D_1 3ri4 209-305 View model · PDB
Predicted = Low DIMER_tr_Q53F65_Q53F65_HUMAN:226:304_5e8i_G_1 5e8i 226-304 View model · PDB
Predicted = Low DIMER_tr_Q53F65_Q53F65_HUMAN:226:308_1dux_F_1 1dux 226-308 View model · PDB
Predicted = Low TFS_tr_Q53F65_Q53F65_HUMAN:209:305_2nny_B_1 2nny 209-305 View model · PDB
Predicted = Low TFS_tr_Q53F65_Q53F65_HUMAN:220:312_8e67_A_1 8e67 220-312 View model · PDB
Predicted = Low TFS_tr_Q53F65_Q53F65_HUMAN:222:312_8e66_A_1 8e66 222-312 View model · PDB
Predicted = Low TFS_tr_Q53F65_Q53F65_HUMAN:224:312_4mhg_A_1 4mhg 224-312 View model · PDB
Predicted = Low TFS_tr_Q53F65_Q53F65_HUMAN:226:305_2stt_A_1 2stt 226-305 View model · PDB
Predicted = Low TFS_tr_Q53F65_Q53F65_HUMAN:226:305_2stw_A_1 2stw 226-305 View model · PDB
Predicted = Low TFS_tr_Q53F65_Q53F65_HUMAN:226:306_3jtg_A_1 3jtg 226-306 View model · PDB
Predicted = Low TFS_tr_Q53F65_Q53F65_HUMAN:226:308_1dux_F_1 1dux 226-308 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
3 4mhg 209:312 224 312 P:A · DNA:B,C 82.0% / 95.5% 98 View · PDB TFS_tr_Q53F65_Q53F65_HUMAN:224:312_4mhg_A_1
1 8e67 209:312 220 312 P:A · DNA:B,C 80.6% / 94.6% 100 View · PDB TFS_tr_Q53F65_Q53F65_HUMAN:220:312_8e67_A_1
2 8e66 209:312 222 312 P:A · DNA:B,C 80.2% / 94.5% 98 View · PDB TFS_tr_Q53F65_Q53F65_HUMAN:222:312_8e66_A_1
1 1dux 209:312 226,226 308,308 P:C,F · DNA:A,B 45.8% / 65.1% 96,96 View · PDB DIMER_tr_Q53F65_Q53F65_HUMAN:226:308_1dux_F_1
4 1dux 209:312 226,226 308,308 P:C,F · DNA:A,B 45.8% / 65.1% 96,96 View · PDB TFS_tr_Q53F65_Q53F65_HUMAN:226:308_1dux_F_1
5 5e8i 209:312 226,226 304,304 P:A,G · DNA:B,C 40.5% / 65.8% 83,83 View · PDB DIMER_tr_Q53F65_Q53F65_HUMAN:226:304_5e8i_G_1
2 2nny 209:312 209,209 305,305 P:A,B · DNA:C,D 38.8% / 59.2% 74,74 View · PDB DIMER_tr_Q53F65_Q53F65_HUMAN:209:305_2nny_B_1
3 3ri4 209:312 209,209 305,305 P:A,D · DNA:B,C 38.8% / 59.2% 70,70 View · PDB DIMER_tr_Q53F65_Q53F65_HUMAN:209:305_3ri4_D_1
4 3mfk 209:312 209,209 305,305 P:A,B · DNA:C,D 38.8% / 59.2% 69,70 View · PDB DIMER_tr_Q53F65_Q53F65_HUMAN:209:305_3mfk_B_1
5 2nny 209:312 209,209 305,305 P:A,B · DNA:C,D 38.8% / 59.2% 74,74 View · PDB TFS_tr_Q53F65_Q53F65_HUMAN:209:305_2nny_B_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
47-116PF02198Sterile alpha motif (SAM)/Pointed domainNo overlap with loaded model regions
226-304PF00178Ets-domainoverlaps 209-312