ModCRE DB

Transcription factor

Q59EY3

Sp1 transcription factor variant

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 563 aa

67 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)5
MotifPredictionSourceDNA bindingSupportLogoActions
MA0079.1 NN 70+% JASPAR GGGGCGGGGT 99.8% identity Open · Scan
M00765_2.00 NN 70+% CisBP CCCGCCCCC 95.0% identity Open · Scan
M00954_2.00 NN 70+% CisBP CTACCCTA 83.7% identity Open · Scan
M00951_2.00 NN 70+% CisBP GCTGCACG 79.0% identity Open · Scan
M02903_2.00 NN 70+% CisBP ATGCCACGCCCCTTTTTG 71.1% identity Open · Scan
Nearest Neighbor (70% - 40%)62
MotifPredictionSourceDNA bindingSupportLogoActions
MA0657.1 NN 70-40% JASPAR ATGCCACGCCCCTTTTTG 69.3% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 69.1% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 68.9% identity Open · Scan
MA0747.1 NN 70-40% JASPAR GCCACGCCCACT 67.7% identity Open · Scan
M00777_2.00 NN 70-40% CisBP ACCGTTAT 67.0% identity Open · Scan
MA1107.1 NN 70-40% JASPAR GGCCACACCCACC 67.0% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 64.7% identity Open · Scan
MA1513.1 NN 70-40% JASPAR GCCCCGCCCCC 63.9% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 63.5% identity Open · Scan
M00632_2.00 NN 70-40% CisBP ACACGCCCCT 62.3% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 59.7% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 59.6% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 58.6% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 58.5% identity Open · Scan
M08246_2.00 NN 70-40% CisBP GCCCCACCCA 58.4% identity Open · Scan
MA1511.1 NN 70-40% JASPAR GCCACACCCCC 58.4% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 58.1% identity Open · Scan
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 57.8% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 57.8% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 57.8% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 57.8% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 57.4% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 57.2% identity Open · Scan
M00617_2.00 NN 70-40% CisBP CCACGCCCA 56.6% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 56.1% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 56.1% identity Open · Scan
M04555_2.00 NN 70-40% CisBP GCCACGCCCCCGCCACGCCCAC 55.5% identity Open · Scan
MA1512.1 NN 70-40% JASPAR GCCACGCCCAC 55.5% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 55.2% identity Open · Scan
M00647_2.00 NN 70-40% CisBP CCCCCCC 55.0% identity Open · Scan
MA1517.1 NN 70-40% JASPAR GGCCACGCCCA 54.6% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 54.3% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 54.3% identity Open · Scan
M01470_2.00 NN 70-40% CisBP CCCCCCGC 54.1% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 53.9% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 53.9% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 53.9% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 53.9% identity Open · Scan
M00036_2.00 NN 70-40% CisBP TACCCCTT 53.4% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 53.1% identity Open · Scan
M01192_2.00 NN 70-40% CisBP CCCCCTGA 53.1% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 53.1% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 52.9% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 52.8% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 52.7% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 52.6% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 52.6% identity Open · Scan
MA0746.1 NN 70-40% JASPAR GCCACGCCCCC 52.0% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 51.3% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 51.3% identity Open · Scan
M01432_2.00 NN 70-40% CisBP GACGCCAC 51.1% identity Open · Scan
M01035_2.00 NN 70-40% CisBP CCCCCTTAAT 51.0% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 51.0% identity Open · Scan
M06122_2.00 NN 70-40% CisBP GATACGCCCCCTAA 50.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 50.0% identity Open · Scan
M01039_2.00 NN 70-40% CisBP CCCCCTA 50.0% identity Open · Scan
M01199_2.00 NN 70-40% CisBP GCGCCACC 50.0% identity Open · Scan
M01444_2.00 NN 70-40% CisBP CACTGCCAC 50.0% identity Open · Scan
M01445_2.00 NN 70-40% CisBP ACACGCCGT 50.0% identity Open · Scan
M01540_2.00 NN 70-40% CisBP CTCCCCC 50.0% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 50.0% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 563 aa
402-486

Region 402-486 0 PWM

Residues
85 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1JK2
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 402-4861 model
Actions
Predicted = Low TFS_Q59EY3:402:486_1jk2_A_1 1jk2 402-486 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
404-428PF00096Zinc finger, C2H2 typeoverlaps 402-486
434-458PF00096Zinc finger, C2H2 typeoverlaps 402-486
464-486PF00096Zinc finger, C2H2 typeoverlaps 402-486