ModCRE DB

Transcription factor

Q59EZ7

C2H2-type domain-containing protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 488 aa

54 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)50
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 68.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 63.5% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 62.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.3% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 61.9% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 61.1% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 61.1% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 60.9% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 60.7% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 60.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 60.6% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 60.0% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 59.5% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 58.0% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 57.4% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 57.3% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 56.5% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 56.0% identity Open · Scan
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 55.9% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 55.8% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 54.3% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 53.8% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 53.8% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 53.6% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 53.5% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.5% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 53.5% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 53.4% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 53.4% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 53.1% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 52.9% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 52.8% identity Open · Scan
M07650_2.00 NN 70-40% CisBP GGTCTATAAAAGGGGGGCCGCGGGGGGG 52.7% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 52.2% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.1% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.9% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 51.8% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 51.8% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 51.7% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 51.5% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 51.4% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 51.3% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 50.8% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 50.8% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.7% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 50.6% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.4% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 50.2% identity Open · Scan
ModCRE4
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_Q59EZ7_Q59EZ7_HUMAN:210:488_5wjq_D_1 ModCRE Homology model GGGGGCCGACGCTTCCCCCACCCGCCCC Region 210-488 · 1 3D model Open · Scan
TFS_tr_Q59EZ7_Q59EZ7_HUMAN:212:488_5v3j_E_1 ModCRE Homology model GGGGAAGTGCCCCCCCCCCCTGGGGG Region 212-488 · 1 3D model Open · Scan
TFS_tr_Q59EZ7_Q59EZ7_HUMAN:212:488_5v3m_C_1 ModCRE Homology model GGGACCCCCCCCCCCCCACCCACCCC Region 212-488 · 1 3D model Open · Scan
TFS_tr_Q59EZ7_Q59EZ7_HUMAN:334:487_2i13_A_1 ModCRE Homology model TCAAGTCTGAAGCAGTAGGGT Region 334-487 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 488 aa
210-488

Region 210-488 4 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 210-4886 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q59EZ7_Q59EZ7_HUMAN:379:428_1llm_D_1 1llm 379-428 View model · PDB
Predicted = Low TFS_tr_Q59EZ7_Q59EZ7_HUMAN:210:488_5wjq_D_1 5wjq 210-488 View model · PDB
Predicted = Low TFS_tr_Q59EZ7_Q59EZ7_HUMAN:212:488_5v3j_E_1 5v3j 212-488 View model · PDB
Predicted = Low TFS_tr_Q59EZ7_Q59EZ7_HUMAN:212:488_5v3m_C_1 5v3m 212-488 View model · PDB
Predicted = Low TFS_tr_Q59EZ7_Q59EZ7_HUMAN:216:483_7w1m_H_1 7w1m 216-483 View model · PDB
Predicted = Low TFS_tr_Q59EZ7_Q59EZ7_HUMAN:334:487_2i13_A_1 2i13 334-487 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 210:488 334 487 P:A · DNA:C,D 56.5% / 71.4% 100 View · PDB TFS_tr_Q59EZ7_Q59EZ7_HUMAN:334:487_2i13_A_1
2 5v3m 210:488 212 488 P:C · DNA:A,B 46.6% / 64.6% 100 View · PDB TFS_tr_Q59EZ7_Q59EZ7_HUMAN:212:488_5v3m_C_1
3 5v3j 210:488 212 488 P:E · DNA:A,B 46.6% / 64.6% 100 View · PDB TFS_tr_Q59EZ7_Q59EZ7_HUMAN:212:488_5v3j_E_1
1 5wjq 210:488 210 488 P:D · DNA:A,B 46.2% / 68.1% 99 View · PDB TFS_tr_Q59EZ7_Q59EZ7_HUMAN:210:488_5wjq_D_1
1 1llm 210:488 379,379 428,428 P:C,D · DNA:A,B 44.0% / 66.0% 57,58 View · PDB DIMER_tr_Q59EZ7_Q59EZ7_HUMAN:379:428_1llm_D_1
5 7w1m 210:488 216 483 P:H · DNA:F,G 36.6% / 46.9% 83 View · PDB TFS_tr_Q59EZ7_Q59EZ7_HUMAN:216:483_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
103-125PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
297-319PF00096Zinc finger, C2H2 typeoverlaps 210-488
325-347PF00096Zinc finger, C2H2 typeoverlaps 210-488
353-375PF00096Zinc finger, C2H2 typeoverlaps 210-488
381-403PF00096Zinc finger, C2H2 typeoverlaps 210-488
409-431PF13912C2H2-type zinc fingeroverlaps 210-488
437-459PF00096Zinc finger, C2H2 typeoverlaps 210-488
465-487PF00096Zinc finger, C2H2 typeoverlaps 210-488