ModCRE DB

Transcription factor

Q59F07

GLI-Kruppel family member GLI4 variant

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 127 aa

186 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)13
MotifPredictionSourceDNA bindingSupportLogoActions
M08365_2.00 NN 70+% CisBP GCCAGCAGCCATCAG 74.1% identity Open · Scan
M08985_2.00 NN 70+% CisBP TGAGGACCTACTGTGTGCC 74.1% identity Open · Scan
M04475_2.00 NN 70+% CisBP GATGCACGTACCGTGCCTCA 72.5% identity Open · Scan
M07607_2.00 NN 70+% CisBP GGCTCCACG 72.5% identity Open · Scan
MA1587.1 NN 70+% JASPAR CCTCGACCTCCTGA 72.5% identity Open · Scan
M00939_2.00 NN 70+% CisBP CCACCTCA 72.1% identity Open · Scan
M08334_2.00 NN 70+% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 72.1% identity Open · Scan
M07689_2.00 NN 70+% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 70.9% identity Open · Scan
M08347_2.00 NN 70+% CisBP GCCCTGGGCAGC 70.9% identity Open · Scan
M08395_2.00 NN 70+% CisBP GCTGCCTACTCTTCC 70.9% identity Open · Scan
M08944_2.00 NN 70+% CisBP TACCATGCTGTTTTGATTAC 70.9% identity Open · Scan
MA1124.1 NN 70+% JASPAR CATTCATTCATTC 70.9% identity Open · Scan
M08342_2.00 NN 70+% CisBP GCTCTGCCTCCCTCT 70.4% identity Open · Scan
Nearest Neighbor (70% - 40%)173
MotifPredictionSourceDNA bindingSupportLogoActions
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 69.8% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 69.3% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 69.3% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 69.3% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 69.3% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 69.3% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 69.3% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 69.3% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 69.3% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 69.3% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 68.8% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 68.8% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 68.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 67.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 67.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 67.7% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 67.7% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 67.7% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 67.7% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 67.7% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 67.7% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 67.7% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 67.7% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 67.7% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 67.2% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 67.2% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 67.2% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 67.2% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 67.2% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 67.2% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 66.1% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 66.1% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 66.1% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 66.1% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 66.1% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 66.1% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 66.1% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 66.1% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 66.1% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 66.1% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 66.1% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 66.1% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 66.1% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 66.1% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 66.1% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 66.0% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 65.5% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 65.5% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 65.5% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 65.5% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.5% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 64.5% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 64.5% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 64.5% identity Open · Scan
M08239_2.00 NN 70-40% CisBP GGGCCGCTCTAGGCTGCCGG 64.5% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 64.5% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 64.5% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 64.5% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 64.5% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 63.9% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 63.9% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 63.9% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 63.4% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 63.4% identity Open · Scan
M00250_2.00 NN 70-40% CisBP AATGCTAACT 62.9% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 62.9% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 62.9% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 62.9% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 62.9% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 62.9% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 62.9% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 62.9% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 62.9% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 62.9% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 62.9% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 62.9% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 62.9% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 62.9% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 62.9% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 62.9% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 62.7% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 62.2% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 62.2% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 62.2% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 62.2% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 62.2% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 61.9% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 61.2% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 61.2% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 61.2% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 61.2% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 61.2% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 61.2% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 61.2% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 61.2% identity Open · Scan
M07674_2.00 NN 70-40% CisBP AAATCCTTGACAATCAAGGGTTCCCTCAC 61.2% identity Open · Scan
M07680_2.00 NN 70-40% CisBP AACCCCAAC 61.2% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 61.2% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 61.2% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 60.6% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 60.6% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 60.6% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 60.6% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 60.3% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 59.6% identity Open · Scan
M07679_2.00 NN 70-40% CisBP TGCGATCTC 59.6% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 59.6% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 59.0% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 59.0% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 59.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 59.0% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 58.8% identity Open · Scan
M00785_2.00 NN 70-40% CisBP TTCACTTCCT 58.4% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 58.0% identity Open · Scan
M07631_2.00 NN 70-40% CisBP AATTTCAAAAATGCTATGGGC 58.0% identity Open · Scan
M07750_2.00 NN 70-40% CisBP CTTCTGACACCA 58.0% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 57.3% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 57.3% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 57.1% identity Open · Scan
MA1652.1 NN 70-40% JASPAR GGAGGAGGTGAGAA 56.9% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 56.4% identity Open · Scan
M07623_2.00 NN 70-40% CisBP GTCTAATAGAGCTGGGCTGCA 56.4% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 56.4% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 55.7% identity Open · Scan
M06131_2.00 NN 70-40% CisBP ATGTCAAGCCCAAACAAAACCAAAA 55.7% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 55.1% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 54.8% identity Open · Scan
M07720_2.00 NN 70-40% CisBP TGTGTGTGTGGGCATGTGTGTGTGCGAGT 54.8% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 54.8% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 54.5% identity Open · Scan
MA0748.1 NN 70-40% JASPAR GTCCGCCATTA 54.3% identity Open · Scan
M03701_2.00 NN 70-40% CisBP ATTACAACAACAACC 54.0% identity Open · Scan
M07763_2.00 NN 70-40% CisBP AGAGGTTTCTT 54.0% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 54.0% identity Open · Scan
M08977_2.00 NN 70-40% CisBP AAATCACAGC 54.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 53.9% identity Open · Scan
M07650_2.00 NN 70-40% CisBP GGTCTATAAAAGGGGGGCCGCGGGGGGG 53.9% identity Open · Scan
M07625_2.00 NN 70-40% CisBP TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 53.8% identity Open · Scan
MA0146.1 NN 70-40% JASPAR GGGGCCGAGGCCTG 53.6% identity Open · Scan
M03702_2.00 NN 70-40% CisBP GACCCCCCACGACGC 53.5% identity Open · Scan
M07703_2.00 NN 70-40% CisBP CCGACGG 53.2% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 53.1% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 52.8% identity Open · Scan
MA1651.1 NN 70-40% JASPAR GTTCCAAAATGGCTGCCTCCG 52.6% identity Open · Scan
M04587_2.00 NN 70-40% CisBP GTACCTACCGC 52.4% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 52.4% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 52.4% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 52.4% identity Open · Scan
M03711_2.00 NN 70-40% CisBP TTTTTTTTGCATTTTTT 52.3% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 51.7% identity Open · Scan
M08358_2.00 NN 70-40% CisBP CCCTCCCCCTCC 51.6% identity Open · Scan
M08966_2.00 NN 70-40% CisBP CCAGCGCCCCCTGGTGGCCA 51.6% identity Open · Scan
MA0139.1 NN 70-40% JASPAR TGGCCACCAGGGGGCGCTA 51.6% identity Open · Scan
M00613_2.00 NN 70-40% CisBP TTTTTTTC 51.5% identity Open · Scan
MA0095.1 NN 70-40% JASPAR GCCATC 51.5% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 51.2% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 51.2% identity Open · Scan
MA0751.1 NN 70-40% JASPAR GACCCCCCGCTGTGC 50.9% identity Open · Scan
M03691_2.00 NN 70-40% CisBP ATGCAACAGGTGG 50.8% identity Open · Scan
M06058_2.00 NN 70-40% CisBP CTGCTACTGTT 50.8% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 50.8% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 50.7% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 50.7% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.6% identity Open · Scan
M02667_2.00 NN 70-40% CisBP TATTATCTTATCTT 50.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.0% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 50.0% identity Open · Scan
M06053_2.00 NN 70-40% CisBP GAAGCCATAACGGC 50.0% identity Open · Scan
M07758_2.00 NN 70-40% CisBP CGCCCTC 50.0% identity Open · Scan
M08089_2.00 NN 70-40% CisBP GGTGCCCCCTGGTG 50.0% identity Open · Scan
MA0029.1 NN 70-40% JASPAR AAGATAAGATAACA 50.0% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 50.0% identity Open · Scan
MA1102.1 NN 70-40% JASPAR CACCAGGGGGCACC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 127 aa
66-127

Region 66-127 0 PWM

Residues
62 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 66-1271 model
Actions
Predicted = Low TFS_Q59F07:66:127_2i13_A_1 2i13 66-127 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
66-84PF00096Zinc finger, C2H2 typeoverlaps 66-127
90-112PF00096Zinc finger, C2H2 typeoverlaps 66-127