ModCRE DB

Transcription factor

Q59F41

Estrogen receptor beta (Nuclear receptor subfamily 3 group A member 2)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 504 aa

39 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
MA0258.1 NN 70+% JASPAR CAAGGTCACGGTGACCTG 99.7% identity Open · Scan
Nearest Neighbor (70% - 40%)38
MotifPredictionSourceDNA bindingSupportLogoActions
M09275_2.00 NN 70-40% CisBP GGGTCACTTCAGGTCAG 60.0% identity Open · Scan
MA0112.1 NN 70-40% JASPAR CCAGGTCACCGTGACCCC 56.8% identity Open · Scan
M09309_2.00 NN 70-40% CisBP AGGTCAGGGTGACCT 56.3% identity Open · Scan
M03923_2.00 NN 70-40% CisBP AGAACACTGTGTACC 55.8% identity Open · Scan
M03927_2.00 NN 70-40% CisBP GAAACTAGAGCA 55.5% identity Open · Scan
M05669_2.00 NN 70-40% CisBP GAGGTCAT 55.2% identity Open · Scan
M06417_2.00 NN 70-40% CisBP CAGTCCGAAGGTCACCGC 55.2% identity Open · Scan
MA0504.1 NN 70-40% JASPAR AGGGGTCAGAGGTCA 55.2% identity Open · Scan
M01298_2.00 NN 70-40% CisBP AAAGGTCA 55.0% identity Open · Scan
M02392_2.00 NN 70-40% CisBP GAGGTCAA 55.0% identity Open · Scan
M09609_2.00 NN 70-40% CisBP CCAGGAACAG 54.8% identity Open · Scan
MA0071.1 NN 70-40% JASPAR ATCAAGGTCA 54.5% identity Open · Scan
M00820_2.00 NN 70-40% CisBP TAGGTCACC 53.0% identity Open · Scan
M02388_2.00 NN 70-40% CisBP GAGGTCA 53.0% identity Open · Scan
M06413_2.00 NN 70-40% CisBP AAATAGGTCA 53.0% identity Open · Scan
MA1150.1 NN 70-40% JASPAR AATTAGGTCAC 53.0% identity Open · Scan
M05660_2.00 NN 70-40% CisBP GATGTGGGTCAGTGGGTCAG 52.9% identity Open · Scan
MA1531.1 NN 70-40% JASPAR GGGTCAGTAGGTCAG 52.9% identity Open · Scan
MA1532.1 NN 70-40% JASPAR GGGTTAGTGGGTCAT 52.9% identity Open · Scan
M05590_2.00 NN 70-40% CisBP TTCAAGGTCAC 52.2% identity Open · Scan
M09616_2.00 NN 70-40% CisBP TTCAAGGTCA 52.2% identity Open · Scan
MA0505.1 NN 70-40% JASPAR AAGTTCAAGGTCAGC 52.2% identity Open · Scan
MA1540.1 NN 70-40% JASPAR GTCAAGGTCAC 52.2% identity Open · Scan
M02408_2.00 NN 70-40% CisBP TGAGGTCAATTT 51.9% identity Open · Scan
MA1148.1 NN 70-40% JASPAR ATGTAGGTCAAAGGTCAT 51.5% identity Open · Scan
M00686_2.00 NN 70-40% CisBP AGTGATCA 51.4% identity Open · Scan
M05635_2.00 NN 70-40% CisBP GTGACCTCAATGAGGTCAC 50.8% identity Open · Scan
M00690_2.00 NN 70-40% CisBP AAAGATCAAA 50.0% identity Open · Scan
M00812_2.00 NN 70-40% CisBP AGAGGTCACG 50.0% identity Open · Scan
M03928_2.00 NN 70-40% CisBP ATGTAGGTCAAG 50.0% identity Open · Scan
M05584_2.00 NN 70-40% CisBP AGAGGTCACGACCTCT 50.0% identity Open · Scan
M05599_2.00 NN 70-40% CisBP AAAGGTCAA 50.0% identity Open · Scan
M05621_2.00 NN 70-40% CisBP TAGGTCATGACCTA 50.0% identity Open · Scan
M09283_2.00 NN 70-40% CisBP TGAGGTCAAAAAAGTTCAG 50.0% identity Open · Scan
MA1151.1 NN 70-40% JASPAR ATAAGTAGGTCA 50.0% identity Open · Scan
MA1533.1 NN 70-40% JASPAR ATGAACTCGATGAACTC 50.0% identity Open · Scan
MA1535.1 NN 70-40% JASPAR CGAGGTCAC 50.0% identity Open · Scan
MA1550.1 NN 70-40% JASPAR AGGGGTCAAAGGTCAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 504 aa
176-248

Region 176-248 0 PWM

Residues
73 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1HCQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 176-2481 model
Actions
Predicted = Low DIMER_Q59F41:176:248_1hcq_A_1 1hcq 176-248 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
44-157PF12497Estrogen receptor betaNo overlap with loaded model regions
180-248PF00105Double treble clef zinc finger, C4 typeoverlaps 176-248
319-500PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions