ModCRE DB

Transcription factor

Q59F60

TRAF6-inhibitory zinc finger protein variant

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 502 aa

127 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M08381_2.00 NN 70+% CisBP ACATTTTGTCCTCCTAGTCCT 99.7% identity Open · Scan
M00955_2.00 NN 70+% CisBP ACGTCCTCT 82.1% identity Open · Scan
Nearest Neighbor (70% - 40%)125
MotifPredictionSourceDNA bindingSupportLogoActions
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 68.7% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 68.2% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 66.2% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 66.0% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 65.7% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 64.8% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 63.7% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 63.1% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 62.3% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 62.1% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 61.8% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 61.7% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 61.1% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 61.1% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 61.1% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 61.1% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 61.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 61.1% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 60.6% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 60.6% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 60.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 59.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 59.5% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 59.5% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 59.5% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.9% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 58.8% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 58.7% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 58.6% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 58.6% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 58.5% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 58.4% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 58.0% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 57.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 57.3% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 57.3% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 57.0% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 56.8% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 56.7% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 56.6% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 56.4% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.1% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 56.1% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.8% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 55.7% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 55.7% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 55.6% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 55.5% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 55.4% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 55.3% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 55.3% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 55.3% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 55.2% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 55.1% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 55.1% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 55.1% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 55.0% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 54.9% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 54.8% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 54.8% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 54.7% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 54.7% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 54.5% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 54.5% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 54.0% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 54.0% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 54.0% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 53.9% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 53.7% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 53.6% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 53.5% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 53.5% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 53.4% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 53.3% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 53.3% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 53.1% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 53.1% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 52.9% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 52.6% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 52.6% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.5% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 52.3% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 52.3% identity Open · Scan
M07666_2.00 NN 70-40% CisBP ATCTAGCCCCTGCCTACC 52.2% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 52.0% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 52.0% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 51.9% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 51.9% identity Open · Scan
MA0095.1 NN 70-40% JASPAR GCCATC 51.8% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 51.7% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 51.7% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 51.7% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 51.5% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 51.5% identity Open · Scan
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 51.3% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 51.3% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 51.3% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 51.3% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 51.3% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 51.2% identity Open · Scan
M03686_2.00 NN 70-40% CisBP TGATTGCTCTTTT 51.2% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 51.2% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 51.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 51.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.0% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 50.7% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.7% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 50.6% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.6% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 50.6% identity Open · Scan
M08889_2.00 NN 70-40% CisBP GCTGCTCTTTTT 50.6% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 50.6% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 50.6% identity Open · Scan
MA0748.1 NN 70-40% JASPAR GTCCGCCATTA 50.6% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 50.6% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 50.5% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 50.4% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 50.3% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 50.3% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 50.3% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 50.1% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 50.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.0% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 50.0% identity Open · Scan
MA1517.1 NN 70-40% JASPAR GGCCACGCCCA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 502 aa
187-297

Region 187-297 0 PWM

Residues
111 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EGB
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 187-2971 model
Actions
Predicted = Low TFS_Q59F60:187:297_5egb_A_1 5egb 187-297 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
106-126PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
190-212PF00096Zinc finger, C2H2 typeoverlaps 187-297
218-240PF00096Zinc finger, C2H2 typeoverlaps 187-297
246-268PF00096Zinc finger, C2H2 typeoverlaps 187-297
274-296PF00096Zinc finger, C2H2 typeoverlaps 187-297
302-324PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
344-369PF13465Zinc-finger double domainNo overlap with loaded model regions
386-408PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
414-436PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
442-464PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
470-492PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions