ModCRE DB

Transcription factor

Q59FP3

Zinc finger protein 519 variant

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 503 aa

107 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M08255_2.00 NN 70+% CisBP CTCTTCCGGT 99.7% identity Open · Scan
Nearest Neighbor (70% - 40%)106
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 68.2% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 65.0% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 64.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 64.2% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 62.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.3% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 62.3% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 62.3% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 62.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 61.1% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 60.0% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 60.0% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 59.8% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 59.8% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 59.3% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 59.2% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 58.9% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 58.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 58.8% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 58.5% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 58.4% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 58.2% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 57.8% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 57.4% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 57.4% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 57.4% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 57.2% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 57.2% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 57.1% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 57.0% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 56.8% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 56.8% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 56.5% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 56.1% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 55.8% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 55.8% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 55.8% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 55.4% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 55.3% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 55.0% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 55.0% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 55.0% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 55.0% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 54.9% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 54.7% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 54.4% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 54.2% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 54.2% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 54.2% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 54.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 54.1% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 54.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 54.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 54.0% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 53.8% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 53.7% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 53.7% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 53.7% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 53.6% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.4% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 53.4% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 53.3% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 53.2% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 53.1% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 53.1% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 53.1% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 53.1% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 53.0% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.0% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.0% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 52.9% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 52.6% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 52.2% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 52.2% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 52.2% identity Open · Scan
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 52.1% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 52.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 51.8% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 51.8% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.7% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 51.6% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.6% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 51.4% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 51.3% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 51.2% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 51.1% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 51.0% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 50.9% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 50.9% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.9% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 50.9% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.8% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 50.7% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 50.7% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 50.6% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 50.5% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 50.5% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 50.4% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 50.2% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 50.1% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 50.1% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.0% identity Open · Scan
M04555_2.00 NN 70-40% CisBP GCCACGCCCCCGCCACGCCCAC 50.0% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 50.0% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 50.0% identity Open · Scan
MA1512.1 NN 70-40% JASPAR GCCACGCCCAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 503 aa
225-502

Region 225-502 0 PWM

Residues
278 aa
Domains
PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 225-5021 model
Actions
Predicted = Low TFS_Q59FP3:225:502_5wjq_D_1 5wjq 225-502 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
269-294PF13465Zinc-finger double domainoverlaps 225-502
311-333PF00096Zinc finger, C2H2 typeoverlaps 225-502
339-361PF00096Zinc finger, C2H2 typeoverlaps 225-502
367-389PF00096Zinc finger, C2H2 typeoverlaps 225-502
395-417PF00096Zinc finger, C2H2 typeoverlaps 225-502
423-445PF00096Zinc finger, C2H2 typeoverlaps 225-502
451-473PF00096Zinc finger, C2H2 typeoverlaps 225-502
479-501PF00096Zinc finger, C2H2 typeoverlaps 225-502