ModCRE DB

Transcription factor

Q59FT1

T-box 2 variant

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 317 aa

32 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)8
MotifPredictionSourceDNA bindingSupportLogoActions
MA0688.1 NN 70+% JASPAR AAGGTGTGAAA 99.6% identity Open · Scan
M08044_2.00 NN 70+% CisBP GCATTCTGGGAATTGTAGTTT 97.6% identity Open · Scan
M02495_2.00 NN 70+% CisBP TTGACACCTC 87.5% identity Open · Scan
M02496_2.00 NN 70+% CisBP AAGGTGTCAA 85.9% identity Open · Scan
M01029_2.00 NN 70+% CisBP AGGTGTGA 81.5% identity Open · Scan
M09429_2.00 NN 70+% CisBP AAGGTGCTA 81.1% identity Open · Scan
MA1566.1 NN 70+% JASPAR GAGGTGTGAA 79.2% identity Open · Scan
M01030_2.00 NN 70+% CisBP TTGACACCTC 71.3% identity Open · Scan
Nearest Neighbor (70% - 40%)24
MotifPredictionSourceDNA bindingSupportLogoActions
M02498_2.00 NN 70-40% CisBP AGGTGTCA 66.3% identity Open · Scan
M00833_2.00 NN 70-40% CisBP AGGTGTGA 66.1% identity Open · Scan
M03559_2.00 NN 70-40% CisBP AGGTGTGAAATTTCACACCT 66.1% identity Open · Scan
MA0806.1 NN 70-40% JASPAR AGGTGTGA 66.1% identity Open · Scan
MA0807.1 NN 70-40% JASPAR AGGTGTGA 66.1% identity Open · Scan
MA0689.1 NN 70-40% JASPAR TAGGTGTGAAG 63.6% identity Open · Scan
M09650_2.00 NN 70-40% CisBP CCTGTCAACACC 63.1% identity Open · Scan
M03988_2.00 NN 70-40% CisBP AGGTGTGAA 62.1% identity Open · Scan
M05822_2.00 NN 70-40% CisBP GGAGGTGTGAAT 61.2% identity Open · Scan
MA0805.1 NN 70-40% JASPAR AGGTGTGA 61.2% identity Open · Scan
M03993_2.00 NN 70-40% CisBP GAGGTGTGAA 57.7% identity Open · Scan
M05798_2.00 NN 70-40% CisBP AAAGGTGTGAAA 55.7% identity Open · Scan
MA1567.1 NN 70-40% JASPAR GAGGTGTGAA 55.7% identity Open · Scan
MA1565.1 NN 70-40% JASPAR GGAGGTGTGAAA 55.3% identity Open · Scan
M03994_2.00 NN 70-40% CisBP AAGGTGTGAA 54.9% identity Open · Scan
M03554_2.00 NN 70-40% CisBP AGGTGTGAAATTCACACCT 54.0% identity Open · Scan
MA0803.1 NN 70-40% JASPAR AGGTGTGA 54.0% identity Open · Scan
M00734_2.00 NN 70-40% CisBP GAGGTGTGAA 53.1% identity Open · Scan
M09427_2.00 NN 70-40% CisBP TTAGCAGGGAGGTGTGAAAT 52.9% identity Open · Scan
MA0009.2 NN 70-40% JASPAR TCACACCTAGGTGTGA 52.9% identity Open · Scan
MA0801.1 NN 70-40% JASPAR AGGTGTGA 52.6% identity Open · Scan
MA0009.1 NN 70-40% JASPAR CTAGGTGTGAA 52.3% identity Open · Scan
MA0802.1 NN 70-40% JASPAR AGGTGTGAAA 51.6% identity Open · Scan
MA0800.1 NN 70-40% JASPAR AAGGTGTGAAAAT 50.5% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 317 aa
39-224

Region 39-224 0 PWM

Residues
186 aa
Domains
PF00907 · T-box
3D models
1 active PDB
Templates
1H6F
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 39-2241 model
Actions
Predicted = Low TFS_Q59FT1:39:224_1h6f_B_1 1h6f 39-224 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
44-224PF00907T-boxoverlaps 39-224
242-288PF12598T-box transcription factor 2/3, TAD domainNo overlap with loaded model regions