ModCRE DB

Transcription factor

Q59G67

Zinc finger protein 607 variant

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 389 aa

96 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)90
MotifPredictionSourceDNA bindingSupportLogoActions
M00958_2.00 NN 70-40% CisBP CGGCATCCC 65.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 64.7% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 64.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 63.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 62.3% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 62.3% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 62.0% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 62.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 61.1% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 60.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.6% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 59.2% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 58.6% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 58.6% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 58.6% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 58.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 57.8% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 57.7% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 57.5% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 56.8% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 56.7% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 56.1% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 55.2% identity Open · Scan
M04568_2.00 NN 70-40% CisBP CGTGCCAACC 55.1% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 55.1% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 55.1% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 55.1% identity Open · Scan
MA0738.1 NN 70-40% JASPAR ATGCCCACC 55.1% identity Open · Scan
MA0739.1 NN 70-40% JASPAR ATGCCAACC 55.1% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 55.1% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 54.9% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 54.9% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 54.6% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 54.6% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 54.4% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 54.4% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 54.2% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 53.8% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 53.8% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 53.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 53.6% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 53.5% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 53.5% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 53.4% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 53.4% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 53.2% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 53.2% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.0% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 52.8% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 52.8% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 52.2% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.1% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 52.1% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 52.1% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 52.1% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 51.9% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 51.9% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 51.8% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 51.8% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 51.8% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 51.8% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 51.7% identity Open · Scan
M06039_2.00 NN 70-40% CisBP TATCTGAAA 51.7% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 51.6% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 51.4% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 51.4% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 51.3% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 51.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 51.0% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 51.0% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 51.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.8% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 50.7% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.7% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 50.5% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 50.3% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.2% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.2% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 50.2% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 50.1% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 50.1% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 50.0% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 50.0% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 50.0% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 50.0% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 50.0% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_Q59G67_Q59G67_HUMAN:168:219_1llm_D_1 ModCRE Homology model CCCCGCCGCGGG Region 168-219 · 1 3D model Open · Scan
TFS_tr_Q59G67_Q59G67_HUMAN:55:332_5wjq_D_1 ModCRE Homology model CCCTCCAGTCCCCCCGTCCGCCCGCTCC Region 55-332 · 1 3D model Open · Scan
TFS_tr_Q59G67_Q59G67_HUMAN:58:356_7w1m_H_1 ModCRE Homology model ATGGGGCGCCCCCGCCGAAAAGGCGGCCCGGGTGCCTTACGTT Region 58-356 · 1 3D model Open · Scan
TFS_tr_Q59G67_Q59G67_HUMAN:67:220_2i13_A_1 ModCRE Homology model ATCTAGAAGTAGCAGGTGGTT Region 67-220 · 1 3D model Open · Scan
TFS_tr_Q59G67_Q59G67_HUMAN:85:361_5v3j_E_1 ModCRE Homology model CCCCAGGGCGCGGGGTCCCCGTGGAA Region 85-361 · 1 3D model Open · Scan
TFS_tr_Q59G67_Q59G67_HUMAN:85:361_5v3m_C_1 ModCRE Homology model GCTGACACCCCCCTCCCCCCCCCCCG Region 85-361 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 389 aa
55-361

Region 55-361 6 PWM

Residues
307 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 55-3616 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q59G67_Q59G67_HUMAN:168:219_1llm_D_1 1llm 168-219 View model · PDB
Predicted = Low TFS_tr_Q59G67_Q59G67_HUMAN:55:332_5wjq_D_1 5wjq 55-332 View model · PDB
Predicted = Low TFS_tr_Q59G67_Q59G67_HUMAN:58:356_7w1m_H_1 7w1m 58-356 View model · PDB
Predicted = Low TFS_tr_Q59G67_Q59G67_HUMAN:67:220_2i13_A_1 2i13 67-220 View model · PDB
Predicted = Low TFS_tr_Q59G67_Q59G67_HUMAN:85:361_5v3j_E_1 5v3j 85-361 View model · PDB
Predicted = Low TFS_tr_Q59G67_Q59G67_HUMAN:85:361_5v3m_C_1 5v3m 85-361 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 55:361 67 220 P:A · DNA:C,D 57.1% / 64.3% 100 View · PDB TFS_tr_Q59G67_Q59G67_HUMAN:67:220_2i13_A_1
1 5wjq 55:361 55 332 P:D · DNA:A,B 52.5% / 70.1% 98 View · PDB TFS_tr_Q59G67_Q59G67_HUMAN:55:332_5wjq_D_1
2 5v3m 55:361 85 361 P:C · DNA:A,B 50.9% / 68.6% 100 View · PDB TFS_tr_Q59G67_Q59G67_HUMAN:85:361_5v3m_C_1
3 5v3j 55:361 85 361 P:E · DNA:A,B 50.9% / 68.6% 100 View · PDB TFS_tr_Q59G67_Q59G67_HUMAN:85:361_5v3j_E_1
1 1llm 55:361 168,168 219,219 P:C,D · DNA:A,B 46.2% / 61.5% 59,61 View · PDB DIMER_tr_Q59G67_Q59G67_HUMAN:168:219_1llm_D_1
5 7w1m 55:361 58 356 P:H · DNA:F,G 35.1% / 50.0% 92 View · PDB TFS_tr_Q59G67_Q59G67_HUMAN:58:356_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
2-23PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
58-80PF00096Zinc finger, C2H2 typeoverlaps 55-361
86-108PF00096Zinc finger, C2H2 typeoverlaps 55-361
114-136PF00096Zinc finger, C2H2 typeoverlaps 55-361
142-164PF00096Zinc finger, C2H2 typeoverlaps 55-361
170-192PF00096Zinc finger, C2H2 typeoverlaps 55-361
198-220PF00096Zinc finger, C2H2 typeoverlaps 55-361
226-248PF00096Zinc finger, C2H2 typeoverlaps 55-361
254-276PF00096Zinc finger, C2H2 typeoverlaps 55-361
282-304PF00096Zinc finger, C2H2 typeoverlaps 55-361
338-360PF00096Zinc finger, C2H2 typeoverlaps 55-361
366-388PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions