ModCRE DB

Transcription factor

Q59GL0

Rearranged L-myc fusion sequence variant

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1608 aa

5 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_2jp9_A_1 ModCRE Homology model CCTTGGGGGGAGCCCCG Region 413-519 · 1 3D model Open · Scan
TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_2jpa_A_1 ModCRE Homology model TACAATGGGCCTGG Region 413-519 · 1 3D model Open · Scan
TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_2prt_A_1 ModCRE Homology model TAAACAGCCTCC Region 413-519 · 1 3D model Open · Scan
TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_6b0o_A_1 ModCRE Homology model CTAACGGACGGC Region 413-519 · 1 3D model Open · Scan
TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_6b0r_D_1 ModCRE Homology model CCTCTAGGGACGC Region 413-519 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1608 aa
413-519
865-886

Region 413-519 5 PWM

Residues
107 aa
Domains
No overlapping PFAM annotation recorded
3D models
5 active PDBs · 5 summary rows
Templates
2JP9, 2JPA, 2PRT, 6B0O, 6B0R
Sources
Predicted = Low
Scan this region Show models

Region 865-886 0 PWM

Residues
22 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB · 1 summary row
Templates
1LLM
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 413-5195 models · 5 summary rows
Actions
Predicted = Low TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_2jp9_A_1 2jp9 413-519 View model · PDB
Predicted = Low TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_2jpa_A_1 2jpa 413-519 View model · PDB
Predicted = Low TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_2prt_A_1 2prt 413-519 View model · PDB
Predicted = Low TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_6b0o_A_1 6b0o 413-519 View model · PDB
Predicted = Low TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_6b0r_D_1 6b0r 413-519 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 6b0r 391:522 413 519 P:D · DNA:E,F 27.1% / 45.8% 90 View · PDB TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_6b0r_D_1
2 2jpa 391:522 413 519 P:A · DNA:B,C 27.1% / 45.8% 89 View · PDB TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_2jpa_A_1
3 2jp9 391:522 413 519 P:A · DNA:B,C 27.1% / 45.8% 89 View · PDB TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_2jp9_A_1
4 2prt 391:522 413 519 P:A · DNA:B,C 27.1% / 45.8% 92 View · PDB TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_2prt_A_1
5 6b0o 391:522 413 519 P:A · DNA:B,C 27.1% / 45.8% 89 View · PDB TFS_tr_Q59GL0_Q59GL0_HUMAN:413:519_6b0o_A_1
Region 865-8861 model · 1 summary row
Actions
Predicted = Low DIMER_tr_Q59GL0_Q59GL0_HUMAN:865:886_1llm_C_1 1llm 865-886 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 391:522 865,865 886,886 P:C,D · DNA:A,B 54.5% / 68.2% 25,25 View · PDB DIMER_tr_Q59GL0_Q59GL0_HUMAN:865:886_1llm_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
5-185PF25580Zinc finger protein Rlf-like, TPR repeatsNo overlap with loaded model regions
238-270PF25420ZN292-like C2H2 zinc fingerNo overlap with loaded model regions
866-889PF00096Zinc finger, C2H2 typeoverlaps 865-886
1225-1284PF26218Zinc finger protein 292, C2H2-type zinc fingerNo overlap with loaded model regions