Transcription factor

Q59GP6

Polyhomeotic-like protein 1 variant

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1099 aa

2 Generated PWM 2 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE2

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_tr_Q59GP6_Q59GP6_HUMAN:895:930_5vmz_A_1	ModCRE	Homology model	AAACCAGTGAAA	Region 895-930 · 1 3D model		Open · Scan
TFS_tr_Q59GP6_Q59GP6_HUMAN:895:930_6df9_A_1	ModCRE	Homology model	CTTACAGCCCCA	Region 895-930 · 1 3D model		Open · Scan

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1099 aa

895-930

Residues: 36 aa
Domains: PF21319 · Zinc finger, FCS-type PF16616 · Unstructured region on Polyhomeotic-like protein 1 and 2
3D models: 2 active PDBs · 2 summary rows
Templates: 5VMZ, 6DF9
Sources: Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

2 active PDB models 2 summary rows

Region 895-9302 models · 2 summary rows

				Actions
Predicted = Low	TFS_tr_Q59GP6_Q59GP6_HUMAN:895:930_5vmz_A_1	5vmz	895-930	View model · PDB
Predicted = Low	TFS_tr_Q59GP6_Q59GP6_HUMAN:895:930_6df9_A_1	6df9	895-930	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
1	6df9	895:930	895	930	P:A · DNA:D,E	35.1% / 48.6%	30	View · PDB TFS_tr_Q59GP6_Q59GP6_HUMAN:895:930_6df9_A_1
2	5vmz	895:930	895	930	P:A · DNA:D,E	35.1% / 48.6%	28	View · PDB TFS_tr_Q59GP6_Q59GP6_HUMAN:895:930_5vmz_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
893-922	PF21319	Zinc finger, FCS-type	overlaps 895-930
923-1030	PF16616	Unstructured region on Polyhomeotic-like protein 1 and 2	overlaps 895-930
1034-1097	PF00536	SAM domain (Sterile alpha motif)	No overlap with loaded model regions