Region 48-236 0 PWM
- Residues
- 189 aa
- Domains
- PF04516 · CP2 transcription factor
- 3D models
- 1 active PDB
- Templates
- 5MPF
- Sources
- Structure model
Transcription factor
Q5JV87 - DKFZp564C0164
Uncharacterized protein DKFZp564C0164
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 263 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M04886_2.00 | Known | CisBP | ACCGGTTCGAACCGGT | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
263 aa
48-236
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 48-2361 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_Q5JV87:48:236_5mpf_A_1 | 5mpf | 48-236 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 44-238 | PF04516 | CP2 transcription factor | overlaps 48-236 |