ModCRE DB

Transcription factor

Q5SVQ8 - ZBTB41

Zinc finger and BTB domain-containing protein 41

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 909 aa

12 Generated PWM 12 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M00019_2.00 NN 70-40% CisBP ACCCCTAATT 56.2% identity Open · Scan
M01531_2.00 NN 70-40% CisBP CCCCCCCTAAAT 54.9% identity Open · Scan
ModCRE10
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q5SVQ8_ZBT41_HUMAN:463:742_5wjq_D_1 ModCRE Homology model GCCCCCCCCCCCCCCCCCCCCGCCCCCG Region 463-742 · 1 3D model Open · Scan
TFS_sp_Q5SVQ8_ZBT41_HUMAN:490:742_5v3j_E_1 ModCRE Homology model CCGGGGGGCCCGGACCCCCCAGC Region 490-742 · 1 3D model Open · Scan
TFS_sp_Q5SVQ8_ZBT41_HUMAN:490:742_5v3m_C_1 ModCRE Homology model CCCCCCGGGCCCCGGACCCCCCCA Region 490-742 · 1 3D model Open · Scan
TFS_sp_Q5SVQ8_ZBT41_HUMAN:517:626_5ei9_E_1 ModCRE Homology model CGCCCCCCCGGGGGCCA Region 517-626 · 1 3D model Open · Scan
TFS_sp_Q5SVQ8_ZBT41_HUMAN:517:652_2i13_A_1 ModCRE Homology model GTAGCGCCATGGCCTGCGGGC Region 517-652 · 1 3D model Open · Scan
TFS_sp_Q5SVQ8_ZBT41_HUMAN:552:625_1a1g_A_1 ModCRE Homology model GCCCGGGACC Region 552-625 · 1 3D model Open · Scan
TFS_sp_Q5SVQ8_ZBT41_HUMAN:574:625_5yj3_C_1 ModCRE Homology model TAGAT Region 574-625 · 1 3D model Open · Scan
TFS_sp_Q5SVQ8_ZBT41_HUMAN:669:718_3uk3_C_1 ModCRE Homology model GCTAGGTGTAA Region 669-718 · 1 3D model Open · Scan
TFS_sp_Q5SVQ8_ZBT41_HUMAN:669:718_4is1_C_1 ModCRE Homology model TTTAGGACTAC Region 669-718 · 1 3D model Open · Scan
TFS_sp_Q5SVQ8_ZBT41_HUMAN:669:718_4is1_D_1 ModCRE Homology model GTGGACCTAG Region 669-718 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 909 aa
462-748

Region 462-748 10 PWM

Residues
287 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
12 active PDBs · 6 summary rows
Templates
1A1G, 1LLM, 2I13, 3UK3, 4IS1, 5EI9, 5V3J, 5V3M, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
12 active PDB models 6 summary rows
Region 462-74812 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q5SVQ8_ZBT41_HUMAN:601:655_1llm_C_1 1llm 601-655 View model · PDB
Predicted = Low TFS_sp_Q5SVQ8_ZBT41_HUMAN:462:748_7w1m_H_1 7w1m 462-748 View model · PDB
Predicted = Low TFS_sp_Q5SVQ8_ZBT41_HUMAN:463:742_5wjq_D_1 5wjq 463-742 View model · PDB
Predicted = Low TFS_sp_Q5SVQ8_ZBT41_HUMAN:490:742_5v3j_E_1 5v3j 490-742 View model · PDB
Predicted = Low TFS_sp_Q5SVQ8_ZBT41_HUMAN:490:742_5v3m_C_1 5v3m 490-742 View model · PDB
Predicted = Low TFS_sp_Q5SVQ8_ZBT41_HUMAN:517:626_5ei9_E_1 5ei9 517-626 View model · PDB
Predicted = Low TFS_sp_Q5SVQ8_ZBT41_HUMAN:517:652_2i13_A_1 2i13 517-652 View model · PDB
Predicted = Low TFS_sp_Q5SVQ8_ZBT41_HUMAN:552:625_1a1g_A_1 1a1g 552-625 View model · PDB
Predicted = Low TFS_sp_Q5SVQ8_ZBT41_HUMAN:574:625_5yj3_C_1 5yj3 574-625 View model · PDB
Predicted = Low TFS_sp_Q5SVQ8_ZBT41_HUMAN:669:718_3uk3_C_1 3uk3 669-718 View model · PDB
Predicted = Low TFS_sp_Q5SVQ8_ZBT41_HUMAN:669:718_4is1_C_1 4is1 669-718 View model · PDB
Predicted = Low TFS_sp_Q5SVQ8_ZBT41_HUMAN:669:718_4is1_D_1 4is1 669-718 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 458:750 517 652 P:A · DNA:C,D 46.3% / 64.7% 89 View · PDB TFS_sp_Q5SVQ8_ZBT41_HUMAN:517:652_2i13_A_1
1 1llm 458:750 601,601 655,655 P:C,D · DNA:A,B 40.0% / 54.5% 63,64 View · PDB DIMER_sp_Q5SVQ8_ZBT41_HUMAN:601:655_1llm_C_1
1 5v3m 458:750 490 742 P:C · DNA:A,B 38.4% / 54.1% 87 View · PDB TFS_sp_Q5SVQ8_ZBT41_HUMAN:490:742_5v3m_C_1
2 5v3j 458:750 490 742 P:E · DNA:A,B 38.4% / 54.1% 87 View · PDB TFS_sp_Q5SVQ8_ZBT41_HUMAN:490:742_5v3j_E_1
3 5wjq 458:750 463 742 P:D · DNA:A,B 36.9% / 50.7% 95 View · PDB TFS_sp_Q5SVQ8_ZBT41_HUMAN:463:742_5wjq_D_1
5 7w1m 458:750 462 748 P:H · DNA:F,G 28.5% / 47.1% 86 View · PDB TFS_sp_Q5SVQ8_ZBT41_HUMAN:462:748_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
82-175PF00651BTB/POZ domainNo overlap with loaded model regions
362-383PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
389-411PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
464-485PF00096Zinc finger, C2H2 typeoverlaps 462-748
518-537PF00096Zinc finger, C2H2 typeoverlaps 462-748
548-569PF00096Zinc finger, C2H2 typeoverlaps 462-748
603-625PF00096Zinc finger, C2H2 typeoverlaps 462-748
631-654PF00096Zinc finger, C2H2 typeoverlaps 462-748
668-690PF00096Zinc finger, C2H2 typeoverlaps 462-748
696-718PF00096Zinc finger, C2H2 typeoverlaps 462-748