ModCRE DB

Transcription factor

Q5T0B9 - ZNF362

Zinc finger protein 362

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 420 aa

21 Generated PWM 10 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)12
MotifPredictionSourceDNA bindingSupportLogoActions
M08090_2.00 NN 70-40% CisBP TTTTTTTTTAAA 62.7% identity Open · Scan
M00613_2.00 NN 70-40% CisBP TTTTTTTC 60.0% identity Open · Scan
M06180_2.00 NN 70-40% CisBP GTGCTTTGAGTGTTTTTTTTGGTCG 54.4% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 53.0% identity Open · Scan
M04409_2.00 NN 70-40% CisBP GGCGGCCATTTTGG 51.9% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 51.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 51.8% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 50.6% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 50.6% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 50.6% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 50.6% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 50.6% identity Open · Scan
ModCRE9
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q5T0B9_ZN362_HUMAN:225:363_2i13_A_1 ModCRE Homology model ATTCTAGTAGCATCTTTAAGG Region 225-363 · 1 3D model Open · Scan
TFS_sp_Q5T0B9_ZN362_HUMAN:225:394_5v3j_E_1 ModCRE Homology model GGGGGAGGAAGAGCCGGGCACGTCTA Region 225-394 · 1 3D model Open · Scan
TFS_sp_Q5T0B9_ZN362_HUMAN:225:394_5v3m_C_1 ModCRE Homology model CGGGGGTGACGGGGTTTTCCGTCTT Region 225-394 · 1 3D model Open · Scan
TFS_sp_Q5T0B9_ZN362_HUMAN:225:394_5wjq_D_1 ModCRE Homology model CCGGTATGTACGGGGTTGACAAGATT Region 225-394 · 1 3D model Open · Scan
TFS_sp_Q5T0B9_ZN362_HUMAN:227:338_6e94_A_1 ModCRE Homology model TTATTCCTGACTCTGCTG Region 227-338 · 1 3D model Open · Scan
TFS_sp_Q5T0B9_ZN362_HUMAN:232:335_2jp9_A_1 ModCRE Homology model AAGGGGGGGCCCCCCCA Region 232-335 · 1 3D model Open · Scan
TFS_sp_Q5T0B9_ZN362_HUMAN:253:363_5egb_A_1 ModCRE Homology model CCGACATTGGGAGGACAA Region 253-363 · 1 3D model Open · Scan
TFS_sp_Q5T0B9_ZN362_HUMAN:253:363_5ei9_E_1 ModCRE Homology model CGGGGACGGGCCCCCCC Region 253-363 · 1 3D model Open · Scan
TFS_sp_Q5T0B9_ZN362_HUMAN:254:363_5eh2_F_1 ModCRE Homology model CGGGGAAGGGCCAGTGACT Region 254-363 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 420 aa
225-394

Region 225-394 9 PWM

Residues
170 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
10 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 2JP9, 5EGB, 5EH2, 5EI9, 5V3J, 5V3M, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
10 active PDB models 6 summary rows
Region 225-39410 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q5T0B9_ZN362_HUMAN:253:304_1llm_C_1 1llm 253-304 View model · PDB
Predicted = Low TFS_sp_Q5T0B9_ZN362_HUMAN:225:363_2i13_A_1 2i13 225-363 View model · PDB
Predicted = Low TFS_sp_Q5T0B9_ZN362_HUMAN:225:394_5v3j_E_1 5v3j 225-394 View model · PDB
Predicted = Low TFS_sp_Q5T0B9_ZN362_HUMAN:225:394_5v3m_C_1 5v3m 225-394 View model · PDB
Predicted = Low TFS_sp_Q5T0B9_ZN362_HUMAN:225:394_5wjq_D_1 5wjq 225-394 View model · PDB
Predicted = Low TFS_sp_Q5T0B9_ZN362_HUMAN:227:338_6e94_A_1 6e94 227-338 View model · PDB
Predicted = Low TFS_sp_Q5T0B9_ZN362_HUMAN:232:335_2jp9_A_1 2jp9 232-335 View model · PDB
Predicted = Low TFS_sp_Q5T0B9_ZN362_HUMAN:253:363_5egb_A_1 5egb 253-363 View model · PDB
Predicted = Low TFS_sp_Q5T0B9_ZN362_HUMAN:253:363_5ei9_E_1 5ei9 253-363 View model · PDB
Predicted = Low TFS_sp_Q5T0B9_ZN362_HUMAN:254:363_5eh2_F_1 5eh2 254-363 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 2i13 222:405 225 363 P:A · DNA:C,D 46.8% / 63.3% 90 View · PDB TFS_sp_Q5T0B9_ZN362_HUMAN:225:363_2i13_A_1
5 5ei9 222:405 253 363 P:E · DNA:A,B 45.0% / 57.7% 98 View · PDB TFS_sp_Q5T0B9_ZN362_HUMAN:253:363_5ei9_E_1
3 5v3m 222:405 225 394 P:C · DNA:A,B 38.2% / 55.3% 59 View · PDB TFS_sp_Q5T0B9_ZN362_HUMAN:225:394_5v3m_C_1
4 5v3j 222:405 225 394 P:E · DNA:A,B 38.2% / 55.3% 59 View · PDB TFS_sp_Q5T0B9_ZN362_HUMAN:225:394_5v3j_E_1
2 5wjq 222:405 225 394 P:D · DNA:A,B 38.2% / 54.7% 58 View · PDB TFS_sp_Q5T0B9_ZN362_HUMAN:225:394_5wjq_D_1
1 1llm 222:405 253,253 304,304 P:C,D · DNA:A,B 32.7% / 55.8% 59,61 View · PDB DIMER_sp_Q5T0B9_ZN362_HUMAN:253:304_1llm_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
227-249PF00096Zinc finger, C2H2 typeoverlaps 225-394
255-277PF00096Zinc finger, C2H2 typeoverlaps 225-394
283-305PF00096Zinc finger, C2H2 typeoverlaps 225-394
311-335PF00096Zinc finger, C2H2 typeoverlaps 225-394
341-363PF00096Zinc finger, C2H2 typeoverlaps 225-394
373-393PF00096Zinc finger, C2H2 typeoverlaps 225-394