Region 21-243 2 PWM
- Residues
- 223 aa
- Domains
- PF12251 · snRNA-activating protein complex (SNAPc), subunit 3
- 3D models
- 4 active PDBs · 4 summary rows
- Templates
- 7XUR, 7ZWC, 7ZXE, 8ITY
- Sources
- Predicted = Low
Transcription factor
Q5T282 - SNAPC3
snRNA-activating protein complex subunit 3 (Small nuclear RNA-activating complex polypeptide 3)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 243 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_Q5T282_Q5T282_HUMAN:21:243_8ity_3_1 | ModCRE | Homology model | GGCCCCTATAAT | Region 21-243 · 1 3D model | Open · Scan | |
| TFS_tr_Q5T282_Q5T282_HUMAN:28:243_7xur_B_1 | ModCRE | Homology model | ACAACGGCCCGAT | Region 28-243 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
243 aa
21-243
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
4 active PDB models
4 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 21-2434 models · 4 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_Q5T282_Q5T282_HUMAN:21:243_8ity_3_1 | 8ity | 21-243 | View model · PDB |
| Predicted = Low | TFS_tr_Q5T282_Q5T282_HUMAN:28:243_7xur_B_1 | 7xur | 28-243 | View model · PDB |
| Predicted = Low | TFS_tr_Q5T282_Q5T282_HUMAN:28:243_7zwc_b_1 | 7zwc | 28-243 | View model · PDB |
| Predicted = Low | TFS_tr_Q5T282_Q5T282_HUMAN:28:243_7zxe_b_1 | 7zxe | 28-243 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 8ity | 21:243 | 21 | 243 | P:3 · DNA:X,Y | 75.5% / 75.5% | 55 | View · PDB TFS_tr_Q5T282_Q5T282_HUMAN:21:243_8ity_3_1 |
| 2 | 7xur | 21:243 | 28 | 243 | P:B · DNA:X,Y | 74.8% / 74.8% | 54 | View · PDB TFS_tr_Q5T282_Q5T282_HUMAN:28:243_7xur_B_1 |
| 3 | 7zxe | 21:243 | 28 | 243 | P:b · DNA:N,T | 74.1% / 74.1% | 53 | View · PDB TFS_tr_Q5T282_Q5T282_HUMAN:28:243_7zxe_b_1 |
| 4 | 7zwc | 21:243 | 28 | 243 | P:b · DNA:N,T | 74.1% / 74.1% | 53 | View · PDB TFS_tr_Q5T282_Q5T282_HUMAN:28:243_7zwc_b_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 192-243 | PF12251 | snRNA-activating protein complex (SNAPc), subunit 3 | overlaps 21-243 |