ModCRE DB

Transcription factor

Q5T427 - ZNF438

Zinc finger protein 438

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 392 aa

6 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_Q5T427_Q5T427_HUMAN:72:122_1llm_C_1 ModCRE Homology model TTTGTGCACAAA Region 72-122 · 1 3D model Open · Scan
TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml3_A_1 ModCRE Homology model TCGCCCGGGGGGGCC Region 73-132 · 1 3D model Open · Scan
TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml4_A_1 ModCRE Homology model CTAGTTTTCAAAAGAA Region 73-132 · 1 3D model Open · Scan
TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml5_A_1 ModCRE Homology model CTGAGTTTCGAAAAAG Region 73-132 · 1 3D model Open · Scan
TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml6_A_1 ModCRE Homology model CTCGGTCGCGAAAAA Region 73-132 · 1 3D model Open · Scan
TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml7_A_1 ModCRE Homology model CTAGGACGCAGAAAAA Region 73-132 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 392 aa
72-132

Region 72-132 6 PWM

Residues
61 aa
Domains
PF13894 · C2H2-type zinc finger
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 6ML3, 6ML4, 6ML5, 6ML6, 6ML7
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 72-1326 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q5T427_Q5T427_HUMAN:72:122_1llm_C_1 1llm 72-122 View model · PDB
Predicted = Low TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml3_A_1 6ml3 73-132 View model · PDB
Predicted = Low TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml4_A_1 6ml4 73-132 View model · PDB
Predicted = Low TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml5_A_1 6ml5 73-132 View model · PDB
Predicted = Low TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml6_A_1 6ml6 73-132 View model · PDB
Predicted = Low TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml7_A_1 6ml7 73-132 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 6ml3 45:157 73 132 P:A · DNA:E,F 36.7% / 55.0% 53 View · PDB TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml3_A_1
2 6ml7 45:157 73 132 P:A · DNA:E,F 36.7% / 55.0% 41 View · PDB TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml7_A_1
3 6ml6 45:157 73 132 P:A · DNA:E,F 36.7% / 55.0% 41 View · PDB TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml6_A_1
4 6ml4 45:157 73 132 P:A · DNA:E,F 36.7% / 55.0% 41 View · PDB TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml4_A_1
5 6ml5 45:157 73 132 P:A · DNA:E,F 36.7% / 55.0% 42 View · PDB TFS_tr_Q5T427_Q5T427_HUMAN:73:132_6ml5_A_1
1 1llm 45:157 72,72 122,122 P:C,D · DNA:A,B 31.4% / 51.0% 58,60 View · PDB DIMER_tr_Q5T427_Q5T427_HUMAN:72:122_1llm_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
99-122PF13894C2H2-type zinc fingeroverlaps 72-132