ModCRE DB

Transcription factor

Q5T5D7 - ZNF684

Zinc finger protein 684

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 378 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA1600.1 Known JASPAR ATACAGTCCACCCCTTTA Direct PWM Open · Scan
MA1600.2 Known JASPAR ACAGTCCACCCCTT Direct PWM Open · Scan
M04428_2.00 Known CisBP ATACAGTCCACCCCTTTA Direct PWM Open · Scan
M04429_2.00 Known CisBP ATACAGTCCACCCCTTTA Direct PWM Open · Scan
M07574_2.00 Known CisBP CACCCCTTT Direct PWM Open · Scan
M08240_2.00 Known CisBP ACAGTCCACCCCTT Direct PWM Open · Scan
M08297_2.00 Known CisBP ACAGTCCACCCCTTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 378 aa
138-378

Region 138-378 0 PWM

Residues
241 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 138-3781 model
Actions
Predicted = Low TFS_Q5T5D7:138:378_5v3j_E_1 5v3j 138-378 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
7-48PF01352KRAB boxNo overlap with loaded model regions
159-181PF00096Zinc finger, C2H2 typeoverlaps 138-378
187-209PF00096Zinc finger, C2H2 typeoverlaps 138-378
215-237PF00096Zinc finger, C2H2 typeoverlaps 138-378
243-265PF00096Zinc finger, C2H2 typeoverlaps 138-378
271-293PF00096Zinc finger, C2H2 typeoverlaps 138-378
299-321PF00096Zinc finger, C2H2 typeoverlaps 138-378
327-349PF00096Zinc finger, C2H2 typeoverlaps 138-378
355-377PF00096Zinc finger, C2H2 typeoverlaps 138-378