ModCRE DB

Transcription factor

Q5T6F6 - NR5A1

Nuclear receptor subfamily 5 group A member 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 177 aa

1 Generated PWM 10 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
MA1540.1 Known JASPAR GTCAAGGTCAC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 177 aa
10-111

Region 10-111 0 PWM

Residues
102 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
10 active PDBs
Templates
1LO1, 2A66, 2FF0, 2HAN, 4CN2, 5L0M, 6L6L, 6L6Q, ...
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
10 active PDB models
Region 10-11110 models
Actions
Predicted = Low DIMER_Q5T6F6:12:87_2han_A_1 2han 12-87 View model · PDB
Predicted = Low DIMER_Q5T6F6:12:90_4cn2_D_1 4cn2 12-90 View model · PDB
Predicted = Low DIMER_Q5T6F6:12:94_6l6l_A_1 6l6l 12-94 View model · PDB
Predicted = Low DIMER_Q5T6F6:12:94_6l6q_B_1 6l6q 12-94 View model · PDB
Predicted = Low DIMER_Q5T6F6:13:94_6lc1_G_1 6lc1 13-94 View model · PDB
Predicted = Low TFS_Q5T6F6:10:105_5l0m_A_1 5l0m 10-105 View model · PDB
Predicted = Low TFS_Q5T6F6:10:111_2ff0_A_1 2ff0 10-111 View model · PDB
Predicted = Low TFS_Q5T6F6:11:105_2a66_A_1 2a66 11-105 View model · PDB
Predicted = Low TFS_Q5T6F6:12:90_4cn2_D_1 4cn2 12-90 View model · PDB
Predicted = Low TFS_Q5T6F6:12:95_1lo1_A_1 1lo1 12-95 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
12-79PF00105Double treble clef zinc finger, C4 typeoverlaps 10-111