Region 8-60 3 PWM
- Residues
- 53 aa
- Domains
- PF17682 · Tau95 Triple barrel domain
- 3D models
- 3 active PDBs · 3 summary rows
- Templates
- 6WG3, 6WGE, 7W1M
- Sources
- Predicted = Low
Transcription factor
Q5T7U1 - GTF3C5
General transcription factor 3C polypeptide 5 (TF3C-epsilon) (Transcription factor IIIC 63 kDa subunit) (Transcription factor IIIC subunit epsilon)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 457 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE3
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_Q5T7U1_Q5T7U1_HUMAN:8:60_6wg3_E_1 | ModCRE | Homology model | ACAGGGGT | Region 8-60 · 1 3D model | Open · Scan | |
| TFS_tr_Q5T7U1_Q5T7U1_HUMAN:8:60_6wge_E_1 | ModCRE | Homology model | GGGGGGG | Region 8-60 · 1 3D model | Open · Scan | |
| TFS_tr_Q5T7U1_Q5T7U1_HUMAN:8:60_7w1m_E_1 | ModCRE | Homology model | AAAGTGTG | Region 8-60 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
457 aa
8-60
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
3 active PDB models
3 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 8-603 models · 3 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_Q5T7U1_Q5T7U1_HUMAN:8:60_6wg3_E_1 | 6wg3 | 8-60 | View model · PDB |
| Predicted = Low | TFS_tr_Q5T7U1_Q5T7U1_HUMAN:8:60_6wge_E_1 | 6wge | 8-60 | View model · PDB |
| Predicted = Low | TFS_tr_Q5T7U1_Q5T7U1_HUMAN:8:60_7w1m_E_1 | 7w1m | 8-60 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 7w1m | 8:60 | 8 | 60 | P:E · DNA:F,G | 23.2% / 50.0% | 4 | View · PDB TFS_tr_Q5T7U1_Q5T7U1_HUMAN:8:60_7w1m_E_1 |
| 2 | 6wge | 8:60 | 8 | 60 | P:E · DNA:F,G | 23.2% / 50.0% | 4 | View · PDB TFS_tr_Q5T7U1_Q5T7U1_HUMAN:8:60_6wge_E_1 |
| 3 | 6wg3 | 8:60 | 8 | 60 | P:E · DNA:F,G | 23.2% / 50.0% | 4 | View · PDB TFS_tr_Q5T7U1_Q5T7U1_HUMAN:8:60_6wg3_E_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 25-132 | PF17682 | Tau95 Triple barrel domain | overlaps 8-60 |
| 168-229 | PF09734 | RNA polymerase III transcription factor (TF)IIIC subunit HTH domain | No overlap with loaded model regions |