ModCRE DB

Transcription factor

Q5TA89 - HES5

Transcription factor HES-5 (Class B basic helix-loop-helix protein 38) (bHLHb38) (Hairy and enhancer of split 5)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 166 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA0821.1 Known JASPAR CGGCACGTGCCA Direct PWM Open · Scan
MA0821.2 Known JASPAR GGCACGTGCC Direct PWM Open · Scan
M02809_2.00 Known CisBP CGGCACGTGCCA Direct PWM Open · Scan
M02810_2.00 Known CisBP CGGCACGTGCCG Direct PWM Open · Scan
M04216_2.00 Known CisBP GACACGTGCC Direct PWM Open · Scan
M04217_2.00 Known CisBP GACACGTGCC Direct PWM Open · Scan
M04218_2.00 Known CisBP GCACACTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 166 aa
24-70

Region 24-70 0 PWM

Residues
47 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
4H10
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 24-701 model
Actions
Predicted = Low DIMER_Q5TA89:24:70_4h10_A_1 4h10 24-70 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
18-71PF00010Helix-loop-helix DNA-binding domainoverlaps 24-70
88-121PF07527Hairy OrangeNo overlap with loaded model regions