ModCRE DB

Transcription factor

Q5U0P5

Myogenic factor

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 255 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
MA1641.1 NN 70+% JASPAR GAACAGCTGTTC 99.6% identity Open · Scan
M00120_2.00 NN 70+% CisBP ACACCTGTC 71.1% identity Open · Scan
M03602_2.00 NN 70+% CisBP GCGACAGCTGTCGC 70.6% identity Open · Scan
Nearest Neighbor (70% - 40%)6
MotifPredictionSourceDNA bindingSupportLogoActions
M00743_2.00 NN 70-40% CisBP AGCACGTGTC 68.8% identity Open · Scan
MA0500.2 NN 70-40% JASPAR CAGCAGCTGCTG 65.9% identity Open · Scan
MA0500.1 NN 70-40% JASPAR GACAGCTGCAG 64.8% identity Open · Scan
M04156_2.00 NN 70-40% CisBP AACAGCTGACGC 50.0% identity Open · Scan
MA0667.1 NN 70-40% JASPAR AACAGCTGTT 50.0% identity Open · Scan
MA1618.1 NN 70-40% JASPAR AAACAGATGTTTA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 255 aa
76-140

Region 76-140 0 PWM

Residues
65 aa
Domains
PF01586 · Myogenic Basic domain PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1MDY
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 76-1401 model
Actions
Predicted = Low DIMER_Q5U0P5:76:140_1mdy_A_1 1mdy 76-140 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
14-83PF01586Myogenic Basic domainoverlaps 76-140
84-135PF00010Helix-loop-helix DNA-binding domainoverlaps 76-140
143-214PF12232Myogenic determination factor 5No overlap with loaded model regions