ModCRE DB

Transcription factor

Q5U5N5 - ZNF134

Zinc finger protein 134

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 427 aa

79 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M08392_2.00 NN 70+% CisBP CTTCACCTGCTGAGG 99.7% identity Open · Scan
Nearest Neighbor (70% - 40%)78
MotifPredictionSourceDNA bindingSupportLogoActions
M00950_2.00 NN 70-40% CisBP GCAGCCCA 66.6% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 66.6% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.8% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 65.6% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 64.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 64.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 63.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 63.5% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 62.9% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.9% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 59.7% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 59.2% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 58.7% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 58.5% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 58.1% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 58.1% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 57.6% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 57.6% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 57.5% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 57.2% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 56.8% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 56.6% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 55.0% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.9% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 54.9% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 54.0% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 54.0% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 53.9% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 53.9% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.7% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.7% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.5% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 53.4% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 53.1% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 53.1% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 53.1% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 52.8% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 52.8% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 52.7% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 52.6% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 52.5% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 52.2% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 52.1% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 51.9% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 51.9% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 51.8% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 51.7% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 51.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 51.6% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 51.3% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 51.3% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 51.3% identity Open · Scan
MA0079.1 NN 70-40% JASPAR GGGGCGGGGT 51.3% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 51.3% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 51.1% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 51.1% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 51.1% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 51.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.0% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 50.8% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.7% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 50.7% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 50.6% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 50.6% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.4% identity Open · Scan
M07631_2.00 NN 70-40% CisBP AATTTCAAAAATGCTATGGGC 50.4% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 50.4% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.2% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.0% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 50.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.0% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 50.0% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 50.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 50.0% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 50.0% identity Open · Scan
MA0746.1 NN 70-40% JASPAR GCCACGCCCCC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 427 aa
170-423

Region 170-423 0 PWM

Residues
254 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 170-4231 model
Actions
Predicted = Low TFS_Q5U5N5:170:423_5v3j_E_1 5v3j 170-423 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
176-198PF00096Zinc finger, C2H2 typeoverlaps 170-423
204-226PF00096Zinc finger, C2H2 typeoverlaps 170-423
232-254PF00096Zinc finger, C2H2 typeoverlaps 170-423
260-282PF00096Zinc finger, C2H2 typeoverlaps 170-423
288-310PF00096Zinc finger, C2H2 typeoverlaps 170-423
316-338PF00096Zinc finger, C2H2 typeoverlaps 170-423
344-366PF00096Zinc finger, C2H2 typeoverlaps 170-423
372-394PF00096Zinc finger, C2H2 typeoverlaps 170-423
400-422PF00096Zinc finger, C2H2 typeoverlaps 170-423