ModCRE DB

Transcription factor

Q5VIY5 - ZNF468

Zinc finger protein 468

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 522 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07754_2.00 Known CisBP CGCCCCCTCCCT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 522 aa
240-518

Region 240-518 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 240-5181 model
Actions
Predicted = Low TFS_Q5VIY5:240:518_5wjq_D_1 5wjq 240-518 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-48PF01352KRAB boxNo overlap with loaded model regions
271-293PF00096Zinc finger, C2H2 typeoverlaps 240-518
313-338PF13465Zinc-finger double domainoverlaps 240-518
355-377PF00096Zinc finger, C2H2 typeoverlaps 240-518
383-405PF00096Zinc finger, C2H2 typeoverlaps 240-518
411-433PF00096Zinc finger, C2H2 typeoverlaps 240-518
439-461PF00096Zinc finger, C2H2 typeoverlaps 240-518
467-489PF00096Zinc finger, C2H2 typeoverlaps 240-518
495-517PF00096Zinc finger, C2H2 typeoverlaps 240-518