ModCRE DB

Transcription factor

Q60F94 - ZFHX1B

Smad interacting-protein 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 466 aa

27 Generated PWM 12 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)18
MotifPredictionSourceDNA bindingSupportLogoActions
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 61.5% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 61.5% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 61.5% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 61.5% identity Open · Scan
M07842_2.00 NN 70-40% CisBP CTCACCTG 60.6% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 57.5% identity Open · Scan
M04651_2.00 NN 70-40% CisBP TTCACTATTATAGTGAA 57.5% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 56.8% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 55.6% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 54.5% identity Open · Scan
M00019_2.00 NN 70-40% CisBP ACCCCTAATT 54.0% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 53.6% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.3% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 52.1% identity Open · Scan
M01468_2.00 NN 70-40% CisBP TTACCCCTGA 50.0% identity Open · Scan
M01531_2.00 NN 70-40% CisBP CCCCCCCTAAAT 50.0% identity Open · Scan
M07625_2.00 NN 70-40% CisBP TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 50.0% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 50.0% identity Open · Scan
ModCRE9
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_Q60F94_Q60F94_HUMAN:344:374_3coq_B_1 ModCRE Homology model AATAACTGTTAA Region 344-374 · 1 3D model Open · Scan
TFS_tr_Q60F94_Q60F94_HUMAN:213:264_5k5l_F_1 ModCRE Homology model GTAACACACTCGTA Region 213-264 · 1 3D model Open · Scan
TFS_tr_Q60F94_Q60F94_HUMAN:213:332_5kkq_A_1 ModCRE Homology model TTCCACTAACTAGCCGG Region 213-332 · 1 3D model Open · Scan
TFS_tr_Q60F94_Q60F94_HUMAN:213:332_5t00_A_1 ModCRE Homology model TCTCCACGCGCTGCCGG Region 213-332 · 1 3D model Open · Scan
TFS_tr_Q60F94_Q60F94_HUMAN:213:332_5t0u_A_1 ModCRE Homology model TTACCCTAGCGCTGCGCGATCC Region 213-332 · 1 3D model Open · Scan
TFS_tr_Q60F94_Q60F94_HUMAN:213:332_5yef_A_1 ModCRE Homology model ATTTTCCCGCGCCCCCGGTTTGA Region 213-332 · 1 3D model Open · Scan
TFS_tr_Q60F94_Q60F94_HUMAN:213:332_8sss_A_1 ModCRE Homology model TTCCGCAGGGCGCGCCAGGTTC Region 213-332 · 1 3D model Open · Scan
TFS_tr_Q60F94_Q60F94_HUMAN:280:329_4gzn_C_1 ModCRE Homology model GGGCCCCCCC Region 280-329 · 1 3D model Open · Scan
TFS_tr_Q60F94_Q60F94_HUMAN:280:329_4m9v_C_1 ModCRE Homology model GACCCCCCCC Region 280-329 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 466 aa
213-332
344-374

Region 213-332 8 PWM

Residues
120 aa
Domains
PF05605 · Drought induced 19 protein (Di19), zinc-binding PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
11 active PDBs · 6 summary rows
Templates
1LLM, 4GZN, 4M9V, 5K5L, 5KKQ, 5T00, 5T0U, 5YEF, ...
Sources
Predicted = Low
Scan this region Show models

Region 344-374 1 PWM

Residues
31 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB
Templates
3COQ
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
12 active PDB models 6 summary rows
Region 213-33211 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q60F94_Q60F94_HUMAN:280:328_1llm_C_1 1llm 280-328 View model · PDB
Predicted = Low TFS_tr_Q60F94_Q60F94_HUMAN:213:264_5k5l_F_1 5k5l 213-264 View model · PDB
Predicted = Low TFS_tr_Q60F94_Q60F94_HUMAN:213:332_5kkq_A_1 5kkq 213-332 View model · PDB
Predicted = Low TFS_tr_Q60F94_Q60F94_HUMAN:213:332_5t00_A_1 5t00 213-332 View model · PDB
Predicted = Low TFS_tr_Q60F94_Q60F94_HUMAN:213:332_5t0u_A_1 5t0u 213-332 View model · PDB
Predicted = Low TFS_tr_Q60F94_Q60F94_HUMAN:213:332_5yef_A_1 5yef 213-332 View model · PDB
Predicted = Low TFS_tr_Q60F94_Q60F94_HUMAN:213:332_5yef_B_1 5yef 213-332 View model · PDB
Predicted = Low TFS_tr_Q60F94_Q60F94_HUMAN:213:332_5yef_J_1 5yef 213-332 View model · PDB
Predicted = Low TFS_tr_Q60F94_Q60F94_HUMAN:213:332_8sss_A_1 8sss 213-332 View model · PDB
Predicted = Low TFS_tr_Q60F94_Q60F94_HUMAN:280:329_4gzn_C_1 4gzn 280-329 View model · PDB
Predicted = Low TFS_tr_Q60F94_Q60F94_HUMAN:280:329_4m9v_C_1 4m9v 280-329 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 213:336 280,280 328,328 P:C,D · DNA:A,B 36.7% / 55.1% 56,57 View · PDB DIMER_tr_Q60F94_Q60F94_HUMAN:280:328_1llm_C_1
1 5kkq 213:336 213 332 P:A · DNA:B,C 36.7% / 51.7% 72 View · PDB TFS_tr_Q60F94_Q60F94_HUMAN:213:332_5kkq_A_1
2 5t00 213:336 213 332 P:A · DNA:B,C 36.7% / 51.7% 74 View · PDB TFS_tr_Q60F94_Q60F94_HUMAN:213:332_5t00_A_1
3 5t0u 213:336 213 332 P:A · DNA:B,C 36.7% / 51.7% 62 View · PDB TFS_tr_Q60F94_Q60F94_HUMAN:213:332_5t0u_A_1
4 8sss 213:336 213 332 P:A · DNA:B,C 36.7% / 51.7% 53 View · PDB TFS_tr_Q60F94_Q60F94_HUMAN:213:332_8sss_A_1
5 5yef 213:336 213 332 P:A · DNA:C,D 36.7% / 51.7% 62 View · PDB TFS_tr_Q60F94_Q60F94_HUMAN:213:332_5yef_A_1
Region 344-3741 model
Actions
Predicted = Low DIMER_tr_Q60F94_Q60F94_HUMAN:344:374_3coq_B_1 3coq 344-374 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
211-262PF05605Drought induced 19 protein (Di19), zinc-bindingoverlaps 213-332
282-304PF00096Zinc finger, C2H2 typeoverlaps 213-332
310-330PF00096Zinc finger, C2H2 typeoverlaps 213-332