ModCRE DB

Transcription factor

Q658Q3 - DKFZp666M039

Uncharacterized protein DKFZp666M039

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 289 aa

134 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)128
MotifPredictionSourceDNA bindingSupportLogoActions
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 65.5% identity Open · Scan
M04480_2.00 NN 70-40% CisBP ATTGATTACCCACCCTAC 63.3% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 63.3% identity Open · Scan
M07688_2.00 NN 70-40% CisBP GAGCCCCAAGCA 63.3% identity Open · Scan
M08365_2.00 NN 70-40% CisBP GCCAGCAGCCATCAG 63.3% identity Open · Scan
M07679_2.00 NN 70-40% CisBP TGCGATCTC 62.9% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 62.0% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 62.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 61.1% identity Open · Scan
M00250_2.00 NN 70-40% CisBP AATGCTAACT 60.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 60.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 60.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 60.0% identity Open · Scan
M07666_2.00 NN 70-40% CisBP ATCTAGCCCCTGCCTACC 60.0% identity Open · Scan
M08903_2.00 NN 70-40% CisBP ATTCCATTCTATTCCATTCT 60.0% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 59.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.0% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 58.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 58.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 58.8% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 58.6% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 58.6% identity Open · Scan
M07654_2.00 NN 70-40% CisBP TGCCCCCTGGTGGC 58.6% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 58.3% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 58.0% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 57.9% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 57.6% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 57.6% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 56.9% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 56.8% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 56.6% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 56.5% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 56.5% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 56.5% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 56.5% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 56.4% identity Open · Scan
M05847_2.00 NN 70-40% CisBP AGACCTACTATGC 56.3% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 56.3% identity Open · Scan
MA1585.1 NN 70-40% JASPAR ATAGTAGGTG 56.3% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 56.2% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 55.9% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 55.9% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 55.9% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 55.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 55.6% identity Open · Scan
M04524_2.00 NN 70-40% CisBP TAAATCACTGCATTTCACTCA 55.5% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 55.5% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 55.5% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 55.5% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.5% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 55.5% identity Open · Scan
MA0038.1 NN 70-40% JASPAR CAAATCACTG 55.5% identity Open · Scan
MA0038.2 NN 70-40% JASPAR CAAATCACTGCA 55.5% identity Open · Scan
MA0483.1 NN 70-40% JASPAR AAATCACAGCA 55.5% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 55.2% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 55.2% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 55.2% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 55.2% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 55.2% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 55.2% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 55.1% identity Open · Scan
M07685_2.00 NN 70-40% CisBP CTTTCCAGCCAC 55.1% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 55.1% identity Open · Scan
M07759_2.00 NN 70-40% CisBP GGAGCGCCCCTGCCCGGC 55.1% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 55.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 54.8% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 54.6% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 54.5% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 54.5% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 54.1% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 54.1% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.9% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 53.9% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 53.8% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 53.6% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 53.5% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 53.4% identity Open · Scan
M08234_2.00 NN 70-40% CisBP GTCAACTTGACTGGGCCA 53.3% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 53.3% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.1% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 53.1% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 53.1% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 53.1% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 53.1% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 53.1% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 53.1% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 52.9% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 52.7% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 52.7% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 52.6% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 52.6% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.5% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 52.5% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 52.4% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 52.4% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 52.4% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 52.4% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 52.3% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 52.3% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 52.2% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 52.0% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.8% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 51.8% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 51.7% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 51.7% identity Open · Scan
MA0744.1 NN 70-40% JASPAR ATGCAACAGGTGG 51.7% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 51.5% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 51.5% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 51.3% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 51.3% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 51.0% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 51.0% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 51.0% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 51.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.9% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.9% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 50.5% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 50.3% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 50.3% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 50.3% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 50.1% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 50.1% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 50.0% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 50.0% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 50.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 50.0% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 50.0% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_Q658Q3_Q658Q3_HUMAN:125:173_1llm_D_1 ModCRE Homology model TCCGGCGCGAGG Region 125-173 · 1 3D model Open · Scan
TFS_tr_Q658Q3_Q658Q3_HUMAN:12:288_5wjq_D_1 ModCRE Homology model CCGTCCGCCCCCCCCGAGCGCCCCCCTT Region 12-288 · 1 3D model Open · Scan
TFS_tr_Q658Q3_Q658Q3_HUMAN:135:288_2i13_A_1 ModCRE Homology model ACACTCTAACCCCTGCTGAGT Region 135-288 · 1 3D model Open · Scan
TFS_tr_Q658Q3_Q658Q3_HUMAN:13:288_5v3j_E_1 ModCRE Homology model CACCCGGTCCCAGGTTCCCCGAGGCC Region 13-288 · 1 3D model Open · Scan
TFS_tr_Q658Q3_Q658Q3_HUMAN:13:288_5v3m_C_1 ModCRE Homology model GGGCCCCGGCTCGACTGGGATAAAAA Region 13-288 · 1 3D model Open · Scan
TFS_tr_Q658Q3_Q658Q3_HUMAN:14:288_7w1m_H_1 ModCRE Homology model GTCGGGGGGCGCCCAAAAGGGACGCAGTTCAATCGGGCCCGA Region 14-288 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 289 aa
12-288

Region 12-288 6 PWM

Residues
277 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 12-2886 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q658Q3_Q658Q3_HUMAN:125:173_1llm_D_1 1llm 125-173 View model · PDB
Predicted = Low TFS_tr_Q658Q3_Q658Q3_HUMAN:12:288_5wjq_D_1 5wjq 12-288 View model · PDB
Predicted = Low TFS_tr_Q658Q3_Q658Q3_HUMAN:135:288_2i13_A_1 2i13 135-288 View model · PDB
Predicted = Low TFS_tr_Q658Q3_Q658Q3_HUMAN:13:288_5v3j_E_1 5v3j 13-288 View model · PDB
Predicted = Low TFS_tr_Q658Q3_Q658Q3_HUMAN:13:288_5v3m_C_1 5v3m 13-288 View model · PDB
Predicted = Low TFS_tr_Q658Q3_Q658Q3_HUMAN:14:288_7w1m_H_1 7w1m 14-288 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 10:289 135 288 P:A · DNA:C,D 53.9% / 70.8% 100 View · PDB TFS_tr_Q658Q3_Q658Q3_HUMAN:135:288_2i13_A_1
2 5v3m 10:289 13 288 P:C · DNA:A,B 50.0% / 64.9% 99 View · PDB TFS_tr_Q658Q3_Q658Q3_HUMAN:13:288_5v3m_C_1
3 5v3j 10:289 13 288 P:E · DNA:A,B 50.0% / 64.9% 99 View · PDB TFS_tr_Q658Q3_Q658Q3_HUMAN:13:288_5v3j_E_1
1 5wjq 10:289 12 288 P:D · DNA:A,B 48.7% / 65.7% 98 View · PDB TFS_tr_Q658Q3_Q658Q3_HUMAN:12:288_5wjq_D_1
1 1llm 10:289 125,125 173,173 P:C,D · DNA:A,B 42.9% / 57.1% 56,57 View · PDB DIMER_tr_Q658Q3_Q658Q3_HUMAN:125:173_1llm_D_1
5 7w1m 10:289 14 288 P:H · DNA:F,G 37.1% / 52.1% 85 View · PDB TFS_tr_Q658Q3_Q658Q3_HUMAN:14:288_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
16-36PF00096Zinc finger, C2H2 typeoverlaps 12-288
42-64PF00096Zinc finger, C2H2 typeoverlaps 12-288
70-92PF00096Zinc finger, C2H2 typeoverlaps 12-288
98-120PF00096Zinc finger, C2H2 typeoverlaps 12-288
126-148PF00096Zinc finger, C2H2 typeoverlaps 12-288
156-176PF00096Zinc finger, C2H2 typeoverlaps 12-288
182-204PF00096Zinc finger, C2H2 typeoverlaps 12-288
210-232PF00096Zinc finger, C2H2 typeoverlaps 12-288
238-260PF00096Zinc finger, C2H2 typeoverlaps 12-288
267-288PF00096Zinc finger, C2H2 typeoverlaps 12-288