ModCRE DB

Transcription factor

Q68CP0 - DKFZp686B2325

Zinc finger protein 462 (Zinc finger PBX1-interacting protein)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 2403 aa

6 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_Q68CP0_Q68CP0_HUMAN:1949:2029_1llm_C_1 ModCRE Homology model TTTGTTCACAAA Region 1949-2029 · 1 3D model Open · Scan
TFS_tr_Q68CP0_Q68CP0_HUMAN:1865:2003_5t0u_A_1 ModCRE Homology model TAAATCGGTCTGCGGCCGCTGAT Region 1865-2003 · 1 3D model Open · Scan
TFS_tr_Q68CP0_Q68CP0_HUMAN:1865:2003_7w1m_H_1 ModCRE Homology model GTCGGGGGCGCCGGCGGGTTCAC Region 1865-2003 · 1 3D model Open · Scan
TFS_tr_Q68CP0_Q68CP0_HUMAN:1865:2003_8sss_A_1 ModCRE Homology model CGACTCCGCAATACCCCGCTGGC Region 1865-2003 · 1 3D model Open · Scan
TFS_tr_Q68CP0_Q68CP0_HUMAN:1865:2003_8sst_A_1 ModCRE Homology model TTAAGTGTACGGGCGCCGCTGAC Region 1865-2003 · 1 3D model Open · Scan
TFS_tr_Q68CP0_Q68CP0_HUMAN:1922:1998_5kkq_A_1 ModCRE Homology model TACCCGCGCGAATA Region 1922-1998 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 2403 aa
1865-2029

Region 1865-2029 6 PWM

Residues
165 aa
Domains
No overlapping PFAM annotation recorded
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 5KKQ, 5T0U, 7W1M, 8SSS, 8SST
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 1865-20296 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q68CP0_Q68CP0_HUMAN:1949:2029_1llm_C_1 1llm 1949-2029 View model · PDB
Predicted = Low TFS_tr_Q68CP0_Q68CP0_HUMAN:1865:2003_5t0u_A_1 5t0u 1865-2003 View model · PDB
Predicted = Low TFS_tr_Q68CP0_Q68CP0_HUMAN:1865:2003_7w1m_H_1 7w1m 1865-2003 View model · PDB
Predicted = Low TFS_tr_Q68CP0_Q68CP0_HUMAN:1865:2003_8sss_A_1 8sss 1865-2003 View model · PDB
Predicted = Low TFS_tr_Q68CP0_Q68CP0_HUMAN:1865:2003_8sst_A_1 8sst 1865-2003 View model · PDB
Predicted = Low TFS_tr_Q68CP0_Q68CP0_HUMAN:1922:1998_5kkq_A_1 5kkq 1922-1998 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 5kkq 1789:2029 1922 1998 P:A · DNA:B,C 36.4% / 54.5% 51 View · PDB TFS_tr_Q68CP0_Q68CP0_HUMAN:1922:1998_5kkq_A_1
1 1llm 1789:2029 1949,1949 2029,2029 P:C,D · DNA:A,B 29.6% / 45.7% 89,91 View · PDB DIMER_tr_Q68CP0_Q68CP0_HUMAN:1949:2029_1llm_C_1
1 7w1m 1789:2029 1865 2003 P:H · DNA:F,G 28.8% / 43.2% 42 View · PDB TFS_tr_Q68CP0_Q68CP0_HUMAN:1865:2003_7w1m_H_1
2 8sss 1789:2029 1865 2003 P:A · DNA:B,C 28.8% / 43.2% 69 View · PDB TFS_tr_Q68CP0_Q68CP0_HUMAN:1865:2003_8sss_A_1
3 5t0u 1789:2029 1865 2003 P:A · DNA:B,C 28.8% / 43.2% 80 View · PDB TFS_tr_Q68CP0_Q68CP0_HUMAN:1865:2003_5t0u_A_1
5 8sst 1789:2029 1865 2003 P:A · DNA:B,C 28.8% / 43.2% 69 View · PDB TFS_tr_Q68CP0_Q68CP0_HUMAN:1865:2003_8sst_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
3-30PF23077Zinc finger protein 462, first C2H2 zinc fingerNo overlap with loaded model regions
57-85PF23224Zinc finger protein 462, second C2H2 zinc fingerNo overlap with loaded model regions
738-776PF23225Zinc finger protein 462, seventh C2H2 zinc fingerNo overlap with loaded model regions
818-858PF23225Zinc finger protein 462, seventh C2H2 zinc fingerNo overlap with loaded model regions
925-962PF23225Zinc finger protein 462, seventh C2H2 zinc fingerNo overlap with loaded model regions
1009-1046PF23075Zinc finger protein 462, C2H2 zinc fingerNo overlap with loaded model regions
1088-1127PF23225Zinc finger protein 462, seventh C2H2 zinc fingerNo overlap with loaded model regions
1160-1198PF23225Zinc finger protein 462, seventh C2H2 zinc fingerNo overlap with loaded model regions
1205-1249PF23075Zinc finger protein 462, C2H2 zinc fingerNo overlap with loaded model regions
1363-1404PF23225Zinc finger protein 462, seventh C2H2 zinc fingerNo overlap with loaded model regions
1411-1448PF23225Zinc finger protein 462, seventh C2H2 zinc fingerNo overlap with loaded model regions