ModCRE DB

Transcription factor

Q68DY9 - ZNF772

Zinc finger protein 772

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 489 aa

44 Generated PWM 12 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)37
MotifPredictionSourceDNA bindingSupportLogoActions
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 62.7% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 62.3% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 62.3% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 62.2% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 61.1% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 61.1% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 60.9% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 60.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 60.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 58.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 58.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 58.8% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 57.9% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 57.7% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 57.6% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 57.6% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 57.5% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 57.3% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 55.7% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.4% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.1% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 54.9% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.6% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 54.0% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 53.3% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 53.2% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 53.2% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 52.8% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 52.2% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.7% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 51.5% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 51.3% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.2% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 51.1% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 51.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 50.4% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.2% identity Open · Scan
ModCRE7
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_Q68DY9_ZN772_HUMAN:266:315_1llm_D_1 ModCRE Homology model GTGCGCGCGCGA Region 266-315 · 1 3D model Open · Scan
TFS_sp_Q68DY9_ZN772_HUMAN:247:289_5ei9_E_1 ModCRE Homology model ACCCAGGGGCCGAGT Region 247-289 · 1 3D model Open · Scan
TFS_sp_Q68DY9_ZN772_HUMAN:251:290_2i13_A_1 ModCRE Homology model ATTACCCAGGGCTGAT Region 251-290 · 1 3D model Open · Scan
TFS_sp_Q68DY9_ZN772_HUMAN:257:289_5v3j_E_1 ModCRE Homology model AGTTTTCCCACC Region 257-289 · 1 3D model Open · Scan
TFS_sp_Q68DY9_ZN772_HUMAN:257:289_5v3m_C_1 ModCRE Homology model GGGCCCGGCCT Region 257-289 · 1 3D model Open · Scan
TFS_sp_Q68DY9_ZN772_HUMAN:257:290_5wjq_D_1 ModCRE Homology model AATCTTATATAG Region 257-290 · 1 3D model Open · Scan
TFS_sp_Q68DY9_ZN772_HUMAN:348:457_5ei9_E_1 ModCRE Homology model GCCCAGGGGCCCCCGCC Region 348-457 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 489 aa
247-489

Region 247-489 7 PWM

Residues
243 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
12 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
12 active PDB models 6 summary rows
Region 247-48912 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q68DY9_ZN772_HUMAN:266:315_1llm_D_1 1llm 266-315 View model · PDB
Predicted = Low TFS_sp_Q68DY9_ZN772_HUMAN:247:289_5ei9_E_1 5ei9 247-289 View model · PDB
Predicted = Low TFS_sp_Q68DY9_ZN772_HUMAN:251:290_2i13_A_1 2i13 251-290 View model · PDB
Predicted = Low TFS_sp_Q68DY9_ZN772_HUMAN:251:489_7w1m_H_1 7w1m 251-489 View model · PDB
Predicted = Low TFS_sp_Q68DY9_ZN772_HUMAN:257:289_5v3j_E_1 5v3j 257-289 View model · PDB
Predicted = Low TFS_sp_Q68DY9_ZN772_HUMAN:257:289_5v3m_C_1 5v3m 257-289 View model · PDB
Predicted = Low TFS_sp_Q68DY9_ZN772_HUMAN:257:290_5wjq_D_1 5wjq 257-290 View model · PDB
Predicted = Low TFS_sp_Q68DY9_ZN772_HUMAN:260:489_5v3j_E_1 5v3j 260-489 View model · PDB
Predicted = Low TFS_sp_Q68DY9_ZN772_HUMAN:260:489_5v3m_C_1 5v3m 260-489 View model · PDB
Predicted = Low TFS_sp_Q68DY9_ZN772_HUMAN:263:489_5wjq_D_1 5wjq 263-489 View model · PDB
Predicted = Low TFS_sp_Q68DY9_ZN772_HUMAN:331:484_2i13_A_1 2i13 331-484 View model · PDB
Predicted = Low TFS_sp_Q68DY9_ZN772_HUMAN:348:457_5ei9_E_1 5ei9 348-457 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 251:489 331 484 P:A · DNA:C,D 53.9% / 66.2% 100 View · PDB TFS_sp_Q68DY9_ZN772_HUMAN:331:484_2i13_A_1
1 5v3m 251:489 260 489 P:C · DNA:A,B 50.9% / 66.5% 83 View · PDB TFS_sp_Q68DY9_ZN772_HUMAN:260:489_5v3m_C_1
2 5v3j 251:489 260 489 P:E · DNA:A,B 50.9% / 66.5% 83 View · PDB TFS_sp_Q68DY9_ZN772_HUMAN:260:489_5v3j_E_1
3 5wjq 251:489 263 489 P:D · DNA:A,B 50.2% / 66.1% 80 View · PDB TFS_sp_Q68DY9_ZN772_HUMAN:263:489_5wjq_D_1
1 1llm 251:489 266,266 315,315 P:C,D · DNA:A,B 42.0% / 60.0% 57,58 View · PDB DIMER_sp_Q68DY9_ZN772_HUMAN:266:315_1llm_D_1
5 7w1m 251:489 251 489 P:H · DNA:F,G 34.8% / 48.0% 74 View · PDB TFS_sp_Q68DY9_ZN772_HUMAN:251:489_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
27-67PF01352KRAB boxNo overlap with loaded model regions
266-288PF00096Zinc finger, C2H2 typeoverlaps 247-489
294-316PF00096Zinc finger, C2H2 typeoverlaps 247-489
322-344PF00096Zinc finger, C2H2 typeoverlaps 247-489
350-372PF00096Zinc finger, C2H2 typeoverlaps 247-489
378-400PF00096Zinc finger, C2H2 typeoverlaps 247-489
407-428PF00096Zinc finger, C2H2 typeoverlaps 247-489
434-456PF00096Zinc finger, C2H2 typeoverlaps 247-489
462-484PF00096Zinc finger, C2H2 typeoverlaps 247-489