ModCRE DB

Transcription factor

Q68G74 - LHX8

LIM/homeobox protein Lhx8 (LIM homeobox protein 8)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 356 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
M05213_2.00 Known CisBP CTAACGAG Direct PWM Open · Scan
M05210_2.00 Known CisBP CTAATTAG Direct PWM Open · Scan
M05211_2.00 Known CisBP TAATTGCAATTA Direct PWM Open · Scan
M05212_2.00 Known CisBP CTAATTAA Direct PWM Open · Scan
M05214_2.00 Known CisBP TAATTGCAATTA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 356 aa
225-282

Region 225-282 0 PWM

Residues
58 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
5HOD
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 225-2821 model
Actions
Predicted = Low DIMER_Q68G74:225:282_5hod_A_1 5hod 225-282 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
75-131PF00412LIM domainNo overlap with loaded model regions
136-190PF00412LIM domainNo overlap with loaded model regions
226-282PF00046Homeodomainoverlaps 225-282