ModCRE DB

Transcription factor

Q6BEB4 - SP5

Transcription factor Sp5

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 398 aa

83 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known2
MotifPredictionSourceDNA bindingSupportLogoActions
MA1965.1 Known JASPAR CCCCTCCCCC Direct PWM Open · Scan
MA1965.2 Known JASPAR CCTCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)9
MotifPredictionSourceDNA bindingSupportLogoActions
M03682_2.00 NN 70+% CisBP ACGCCACGCCCAGT 82.2% identity Open · Scan
MA0747.1 NN 70+% JASPAR GCCACGCCCACT 81.3% identity Open · Scan
MA1564.1 NN 70+% JASPAR GCCACGCCCCCC 80.3% identity Open · Scan
M05859_2.00 NN 70+% CisBP GGCCACGCCCACT 80.1% identity Open · Scan
MA0685.1 NN 70+% JASPAR TAAGCCACGCCCCCTTT 79.3% identity Open · Scan
MA0746.1 NN 70+% JASPAR GCCACGCCCCC 77.5% identity Open · Scan
M00765_2.00 NN 70+% CisBP CCCGCCCCC 76.7% identity Open · Scan
MA0079.1 NN 70+% JASPAR GGGGCGGGGT 75.8% identity Open · Scan
MA0516.1 NN 70+% JASPAR GCCCCGCCCCCTCCC 70.0% identity Open · Scan
Nearest Neighbor (70% - 40%)72
MotifPredictionSourceDNA bindingSupportLogoActions
M00954_2.00 NN 70-40% CisBP CTACCCTA 69.7% identity Open · Scan
M02903_2.00 NN 70-40% CisBP ATGCCACGCCCCTTTTTG 69.4% identity Open · Scan
MA0657.1 NN 70-40% JASPAR ATGCCACGCCCCTTTTTG 69.3% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 68.2% identity Open · Scan
M00951_2.00 NN 70-40% CisBP GCTGCACG 65.1% identity Open · Scan
M00777_2.00 NN 70-40% CisBP ACCGTTAT 64.5% identity Open · Scan
MA1107.1 NN 70-40% JASPAR GGCCACACCCACC 64.5% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 63.9% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 63.6% identity Open · Scan
MA1513.1 NN 70-40% JASPAR GCCCCGCCCCC 61.6% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 61.4% identity Open · Scan
M04555_2.00 NN 70-40% CisBP GCCACGCCCCCGCCACGCCCAC 61.2% identity Open · Scan
M08246_2.00 NN 70-40% CisBP GCCCCACCCA 61.2% identity Open · Scan
MA1511.1 NN 70-40% JASPAR GCCACACCCCC 61.2% identity Open · Scan
MA1512.1 NN 70-40% JASPAR GCCACGCCCAC 61.2% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 60.6% identity Open · Scan
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 60.2% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 60.2% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 60.2% identity Open · Scan
M00632_2.00 NN 70-40% CisBP ACACGCCCCT 60.0% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 59.3% identity Open · Scan
M00617_2.00 NN 70-40% CisBP CCACGCCCA 59.0% identity Open · Scan
M00647_2.00 NN 70-40% CisBP CCCCCCC 58.9% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 58.6% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 58.6% identity Open · Scan
MA1517.1 NN 70-40% JASPAR GGCCACGCCCA 57.9% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 57.6% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 56.9% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 56.8% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 56.4% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 56.3% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 56.3% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 56.1% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 56.1% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 55.1% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 55.1% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 55.1% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 55.1% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 54.8% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 54.0% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 54.0% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 53.8% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 53.0% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 52.9% identity Open · Scan
MA0863.1 NN 70-40% JASPAR TTTGCACACGGCAC 52.9% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 52.6% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 52.5% identity Open · Scan
M01470_2.00 NN 70-40% CisBP CCCCCCGC 52.0% identity Open · Scan
MA1514.1 NN 70-40% JASPAR CACCACGCACCCCTT 52.0% identity Open · Scan
M00909_2.00 NN 70-40% CisBP AGGACCCTGT 51.9% identity Open · Scan
M01035_2.00 NN 70-40% CisBP CCCCCTTAAT 51.8% identity Open · Scan
M08239_2.00 NN 70-40% CisBP GGGCCGCTCTAGGCTGCCGG 51.8% identity Open · Scan
M00036_2.00 NN 70-40% CisBP TACCCCTT 51.7% identity Open · Scan
M08320_2.00 NN 70-40% CisBP TTCCCTGCC 51.5% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 51.3% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 51.3% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 51.2% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 51.2% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 51.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 50.0% identity Open · Scan
M01042_2.00 NN 70-40% CisBP TGGGACCTGA 50.0% identity Open · Scan
M01180_2.00 NN 70-40% CisBP ACCCCTGG 50.0% identity Open · Scan
M01199_2.00 NN 70-40% CisBP GCGCCACC 50.0% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.0% identity Open · Scan
M01445_2.00 NN 70-40% CisBP ACACGCCGT 50.0% identity Open · Scan
M01540_2.00 NN 70-40% CisBP CTCCCCC 50.0% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 50.0% identity Open · Scan
M07757_2.00 NN 70-40% CisBP CCGCGGCC 50.0% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 50.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 50.0% identity Open · Scan
M10303_2.00 NN 70-40% CisBP TACTGGGAATACC 50.0% identity Open · Scan
MA1508.1 NN 70-40% JASPAR GAAACAGGAAGT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 398 aa
294-378

Region 294-378 0 PWM

Residues
85 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1A1G
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 294-3781 model
Actions
Predicted = Low TFS_Q6BEB4:294:378_1a1g_A_1 1a1g 294-378 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
296-320PF00096Zinc finger, C2H2 typeoverlaps 294-378
326-350PF00096Zinc finger, C2H2 typeoverlaps 294-378
356-378PF00096Zinc finger, C2H2 typeoverlaps 294-378