ModCRE DB

Transcription factor

Q6IV72 - ZNF425

Zinc finger protein 425

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 752 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07758_2.00 Known CisBP CGCCCTC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 752 aa
271-549

Region 271-549 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 271-5491 model
Actions
Predicted = Low TFS_Q6IV72:271:549_5wjq_D_1 5wjq 271-549 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
9-49PF01352KRAB boxNo overlap with loaded model regions
274-296PF00096Zinc finger, C2H2 typeoverlaps 271-549
304-324PF00096Zinc finger, C2H2 typeoverlaps 271-549
358-380PF00096Zinc finger, C2H2 typeoverlaps 271-549
386-408PF00096Zinc finger, C2H2 typeoverlaps 271-549
414-436PF00096Zinc finger, C2H2 typeoverlaps 271-549
470-492PF00096Zinc finger, C2H2 typeoverlaps 271-549
498-520PF00096Zinc finger, C2H2 typeoverlaps 271-549
526-548PF00096Zinc finger, C2H2 typeoverlaps 271-549
582-604PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
610-632PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
638-660PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
666-688PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
694-716PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
722-744PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions