ModCRE DB

Transcription factor

Q6NUI8 - ZNF510

ZNF510 protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 636 aa

93 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)89
MotifPredictionSourceDNA bindingSupportLogoActions
M00943_2.00 NN 70-40% CisBP CCCGCTGC 68.6% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 68.6% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 66.2% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 65.6% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 65.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 65.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 65.0% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 64.7% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 64.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 63.5% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 63.5% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 62.1% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 61.0% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 60.5% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 60.3% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 60.2% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 59.5% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 59.4% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 58.6% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 58.1% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 58.0% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 57.7% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 57.4% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 57.4% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 57.2% identity Open · Scan
M07633_2.00 NN 70-40% CisBP CTCTCGTTGTGCCTTTGCCAT 57.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 56.8% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 56.5% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 56.4% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 56.0% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 55.8% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 55.7% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 55.6% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 55.6% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 55.5% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 55.5% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 55.4% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.3% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 55.3% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 55.1% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 54.8% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 54.8% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 54.7% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 54.3% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 54.0% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.7% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.7% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 53.6% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 53.5% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 53.3% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 53.3% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 53.3% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 52.8% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.7% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 52.7% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 52.5% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 52.5% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 52.5% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 52.5% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 52.4% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 52.4% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 52.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 52.2% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.1% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 52.0% identity Open · Scan
MA1155.1 NN 70-40% JASPAR TGCACACACTGAAAA 51.7% identity Open · Scan
M07654_2.00 NN 70-40% CisBP TGCCCCCTGGTGGC 51.6% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 51.6% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 51.4% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.4% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 51.2% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 51.2% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 51.2% identity Open · Scan
MA0079.1 NN 70-40% JASPAR GGGGCGGGGT 51.2% identity Open · Scan
MA0746.1 NN 70-40% JASPAR GCCACGCCCCC 51.2% identity Open · Scan
MA0747.1 NN 70-40% JASPAR GCCACGCCCACT 51.2% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 51.2% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 51.2% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 50.8% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.8% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 50.7% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 50.6% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 50.5% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 50.4% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
M07750_2.00 NN 70-40% CisBP CTTCTGACACCA 50.0% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 50.0% identity Open · Scan
ModCRE4
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_Q6NUI8_Q6NUI8_HUMAN:393:635_5wjq_D_1 ModCRE Homology model GTAACCCCCCCCCCCCCCACCCCTATCG Region 393-635 · 1 3D model Open · Scan
TFS_tr_Q6NUI8_Q6NUI8_HUMAN:395:636_5v3j_E_1 ModCRE Homology model CCACCCCCCCCCCCCTGGGGCTTC Region 395-636 · 1 3D model Open · Scan
TFS_tr_Q6NUI8_Q6NUI8_HUMAN:395:636_5v3m_C_1 ModCRE Homology model GGCACCACTTTCCCCCCGTCCCCTA Region 395-636 · 1 3D model Open · Scan
TFS_tr_Q6NUI8_Q6NUI8_HUMAN:441:594_2i13_A_1 ModCRE Homology model GCTGCGCAGTAGGCTCTAAGC Region 441-594 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 636 aa
393-636

Region 393-636 4 PWM

Residues
244 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 8SSR
Sources
Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 393-6366 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q6NUI8_Q6NUI8_HUMAN:542:593_1llm_D_1 1llm 542-593 View model · PDB
Predicted = Low TFS_tr_Q6NUI8_Q6NUI8_HUMAN:393:635_5wjq_D_1 5wjq 393-635 View model · PDB
Predicted = Low TFS_tr_Q6NUI8_Q6NUI8_HUMAN:395:636_5v3j_E_1 5v3j 395-636 View model · PDB
Predicted = Low TFS_tr_Q6NUI8_Q6NUI8_HUMAN:395:636_5v3m_C_1 5v3m 395-636 View model · PDB
Predicted = Low TFS_tr_Q6NUI8_Q6NUI8_HUMAN:402:636_8ssr_A_1 8ssr 402-636 View model · PDB
Predicted = Low TFS_tr_Q6NUI8_Q6NUI8_HUMAN:441:594_2i13_A_1 2i13 441-594 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 393:636 441 594 P:A · DNA:C,D 62.3% / 74.7% 100 View · PDB TFS_tr_Q6NUI8_Q6NUI8_HUMAN:441:594_2i13_A_1
2 5v3m 393:636 395 636 P:C · DNA:A,B 51.2% / 65.3% 87 View · PDB TFS_tr_Q6NUI8_Q6NUI8_HUMAN:395:636_5v3m_C_1
3 5v3j 393:636 395 636 P:E · DNA:A,B 51.2% / 65.3% 87 View · PDB TFS_tr_Q6NUI8_Q6NUI8_HUMAN:395:636_5v3j_E_1
1 5wjq 393:636 393 635 P:D · DNA:A,B 50.2% / 65.8% 86 View · PDB TFS_tr_Q6NUI8_Q6NUI8_HUMAN:393:635_5wjq_D_1
1 1llm 393:636 542,542 593,593 P:C,D · DNA:A,B 50.0% / 67.3% 59,61 View · PDB DIMER_tr_Q6NUI8_Q6NUI8_HUMAN:542:593_1llm_D_1
5 8ssr 393:636 402 636 P:A · DNA:B,C 38.9% / 54.9% 90 View · PDB TFS_tr_Q6NUI8_Q6NUI8_HUMAN:402:636_8ssr_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
45-86PF01352KRAB boxNo overlap with loaded model regions
404-426PF00096Zinc finger, C2H2 typeoverlaps 393-636
432-454PF00096Zinc finger, C2H2 typeoverlaps 393-636
460-482PF00096Zinc finger, C2H2 typeoverlaps 393-636
488-510PF00096Zinc finger, C2H2 typeoverlaps 393-636
516-538PF00096Zinc finger, C2H2 typeoverlaps 393-636
544-566PF00096Zinc finger, C2H2 typeoverlaps 393-636
572-594PF00096Zinc finger, C2H2 typeoverlaps 393-636
600-622PF00096Zinc finger, C2H2 typeoverlaps 393-636