ModCRE DB

Transcription factor

Q6P2D0 - ZFP1

Zinc finger protein 1 homolog (Zfp-1) (Zinc finger protein 475)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 407 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
M05855_2.00 Known CisBP GTATTATACCCAGCT Direct PWM Open · Scan
M04601_2.00 Known CisBP CTTTTATACCCAGCT Direct PWM Open · Scan
M04602_2.00 Known CisBP CTTTTATACCCAGCT Direct PWM Open · Scan
M05854_2.00 Known CisBP CCAGCACAACTAACC Direct PWM Open · Scan
M07670_2.00 Known CisBP CCACTTTTATACCCAACCCTAATATCCA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 407 aa
148-402

Region 148-402 0 PWM

Residues
255 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 148-4021 model
Actions
Predicted = Low TFS_Q6P2D0:148:402_5wjq_D_1 5wjq 148-402 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
7-47PF01352KRAB boxNo overlap with loaded model regions
184-206PF00096Zinc finger, C2H2 typeoverlaps 148-402
212-234PF00096Zinc finger, C2H2 typeoverlaps 148-402
240-262PF00096Zinc finger, C2H2 typeoverlaps 148-402
268-290PF00096Zinc finger, C2H2 typeoverlaps 148-402
296-318PF00096Zinc finger, C2H2 typeoverlaps 148-402
324-346PF00096Zinc finger, C2H2 typeoverlaps 148-402
352-374PF00096Zinc finger, C2H2 typeoverlaps 148-402
380-402PF00096Zinc finger, C2H2 typeoverlaps 148-402