ModCRE DB

Transcription factor

Q6P514 - ZNF468

ZNF468 protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 98 aa

53 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)47
MotifPredictionSourceDNA bindingSupportLogoActions
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 64.5% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 58.3% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 58.3% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 58.3% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 56.2% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.2% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 56.2% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 54.7% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 54.7% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 54.7% identity Open · Scan
M07842_2.00 NN 70-40% CisBP CTCACCTG 54.5% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 54.3% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 54.1% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 54.1% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 54.1% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 54.1% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 54.1% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 54.1% identity Open · Scan
M07720_2.00 NN 70-40% CisBP TGTGTGTGTGGGCATGTGTGTGTGCGAGT 52.5% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 52.3% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 52.3% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 52.0% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 52.0% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 52.0% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 52.0% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 52.0% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 52.0% identity Open · Scan
M00613_2.00 NN 70-40% CisBP TTTTTTTC 51.6% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 50.9% identity Open · Scan
M00909_2.00 NN 70-40% CisBP AGGACCCTGT 50.0% identity Open · Scan
M03701_2.00 NN 70-40% CisBP ATTACAACAACAACC 50.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 50.0% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 50.0% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 50.0% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 50.0% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 50.0% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 50.0% identity Open · Scan
M07731_2.00 NN 70-40% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 50.0% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 50.0% identity Open · Scan
M08312_2.00 NN 70-40% CisBP ATTGGGTTTCTGTTGCTT 50.0% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 50.0% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 50.0% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.0% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 50.0% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 50.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 50.0% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_Q6P514_Q6P514_HUMAN:52:80_1llm_D_1 ModCRE Homology model AAACGCGCGGGG Region 52-80 · 1 3D model Open · Scan
TFS_tr_Q6P514_Q6P514_HUMAN:33:80_2i13_A_1 ModCRE Homology model GCACCCTGCTGGACGCA Region 33-80 · 1 3D model Open · Scan
TFS_tr_Q6P514_Q6P514_HUMAN:33:80_5v3j_E_1 ModCRE Homology model GGAATATTAGAA Region 33-80 · 1 3D model Open · Scan
TFS_tr_Q6P514_Q6P514_HUMAN:33:80_5v3m_C_1 ModCRE Homology model GCAAACTTGCTA Region 33-80 · 1 3D model Open · Scan
TFS_tr_Q6P514_Q6P514_HUMAN:35:80_1g2d_C_1 ModCRE Homology model GGCCTCCTCCCCC Region 35-80 · 1 3D model Open · Scan
TFS_tr_Q6P514_Q6P514_HUMAN:35:80_1g2f_C_1 ModCRE Homology model GGTCTCTTCCTGG Region 35-80 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 98 aa
33-80

Region 33-80 6 PWM

Residues
48 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1G2D, 1G2F, 1LLM, 2I13, 5V3J, 5V3M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 33-806 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q6P514_Q6P514_HUMAN:52:80_1llm_D_1 1llm 52-80 View model · PDB
Predicted = Low TFS_tr_Q6P514_Q6P514_HUMAN:33:80_2i13_A_1 2i13 33-80 View model · PDB
Predicted = Low TFS_tr_Q6P514_Q6P514_HUMAN:33:80_5v3j_E_1 5v3j 33-80 View model · PDB
Predicted = Low TFS_tr_Q6P514_Q6P514_HUMAN:33:80_5v3m_C_1 5v3m 33-80 View model · PDB
Predicted = Low TFS_tr_Q6P514_Q6P514_HUMAN:35:80_1g2d_C_1 1g2d 35-80 View model · PDB
Predicted = Low TFS_tr_Q6P514_Q6P514_HUMAN:35:80_1g2f_C_1 1g2f 35-80 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
3 2i13 22:80 33 80 P:A · DNA:C,D 47.9% / 62.5% 31 View · PDB TFS_tr_Q6P514_Q6P514_HUMAN:33:80_2i13_A_1
4 5v3m 22:80 33 80 P:C · DNA:A,B 47.9% / 62.5% 17 View · PDB TFS_tr_Q6P514_Q6P514_HUMAN:33:80_5v3m_C_1
5 5v3j 22:80 33 80 P:E · DNA:A,B 47.9% / 62.5% 17 View · PDB TFS_tr_Q6P514_Q6P514_HUMAN:33:80_5v3j_E_1
1 1g2f 22:80 35 80 P:C · DNA:A,B 47.8% / 67.4% 51 View · PDB TFS_tr_Q6P514_Q6P514_HUMAN:35:80_1g2f_C_1
2 1g2d 22:80 35 80 P:C · DNA:A,B 45.7% / 69.6% 51 View · PDB TFS_tr_Q6P514_Q6P514_HUMAN:35:80_1g2d_C_1
1 1llm 22:80 52,52 80,80 P:C,D · DNA:A,B 41.4% / 69.0% 33,34 View · PDB DIMER_tr_Q6P514_Q6P514_HUMAN:52:80_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
58-76PF00096Zinc finger, C2H2 typeoverlaps 33-80