Transcription factor

Q6P579 - ZNF83

ZNF83 protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 335 aa

124 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)118

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	69.4% identity		Open · Scan
M04653_2.00	NN 70-40%	CisBP	GGTACGGTTGTCCATGTTGCAA	64.5% identity		Open · Scan
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	63.5% identity		Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	63.5% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	63.5% identity		Open · Scan
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	63.5% identity		Open · Scan
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	63.5% identity		Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	63.5% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	63.5% identity		Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	63.5% identity		Open · Scan
M07635_2.00	NN 70-40%	CisBP	AAGTTTTCTTGTATTATATCT	62.8% identity		Open · Scan
M07764_2.00	NN 70-40%	CisBP	CTGCACTCTCCCCTTCCCCCCCTCCCC	62.6% identity		Open · Scan
M08985_2.00	NN 70-40%	CisBP	TGAGGACCTACTGTGTGCC	62.6% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	62.3% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	62.3% identity		Open · Scan
M02924_2.00	NN 70-40%	CisBP	AGTGTTAACAGAACACCT	61.9% identity		Open · Scan
M08252_2.00	NN 70-40%	CisBP	CCGGCTCCAGCACCC	61.7% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	61.3% identity		Open · Scan
M08934_2.00	NN 70-40%	CisBP	GCTGTACCTGCTTATTAGGC	60.6% identity		Open · Scan
MA1587.1	NN 70-40%	JASPAR	CCTCGACCTCCTGA	59.6% identity		Open · Scan
M04613_2.00	NN 70-40%	CisBP	CTCATGTGCTAATTACAAA	59.4% identity		Open · Scan
M07689_2.00	NN 70-40%	CisBP	ACCCAGGCTCCTTCCATCTTGTGGCTC	59.4% identity		Open · Scan
MA1124.1	NN 70-40%	JASPAR	CATTCATTCATTC	59.4% identity		Open · Scan
M07579_2.00	NN 70-40%	CisBP	CATCTCCAGGA	59.1% identity		Open · Scan
M08944_2.00	NN 70-40%	CisBP	TACCATGCTGTTTTGATTAC	59.1% identity		Open · Scan
MA1597.1	NN 70-40%	JASPAR	CCCAGGGAAGCCATTTC	59.0% identity		Open · Scan
M08395_2.00	NN 70-40%	CisBP	GCTGCCTACTCTTCC	58.9% identity		Open · Scan
M07699_2.00	NN 70-40%	CisBP	GGTTTAT	58.7% identity		Open · Scan
M08256_2.00	NN 70-40%	CisBP	GTGCCTT	58.7% identity		Open · Scan
M07590_2.00	NN 70-40%	CisBP	TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT	58.6% identity		Open · Scan
M07714_2.00	NN 70-40%	CisBP	AGCCCATTGGGGCCTATGCCC	58.4% identity		Open · Scan
M07723_2.00	NN 70-40%	CisBP	CCGCTGCTCCCTGCT	58.4% identity		Open · Scan
M04650_2.00	NN 70-40%	CisBP	GCATAACTGCCCCGCTGCC	57.5% identity		Open · Scan
M07587_2.00	NN 70-40%	CisBP	CCCCCTCCCCAGTCGAGCCCCCGC	57.5% identity		Open · Scan
M08255_2.00	NN 70-40%	CisBP	CTCTTCCGGT	57.4% identity		Open · Scan
M08917_2.00	NN 70-40%	CisBP	GCTGAGCCATGTGGGGTGCT	57.3% identity		Open · Scan
M08371_2.00	NN 70-40%	CisBP	CCAGACTTGTCCTCT	57.1% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	57.0% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	56.8% identity		Open · Scan
M07649_2.00	NN 70-40%	CisBP	CCCCCCCCCCCCTCAGGAATGCC	56.7% identity		Open · Scan
M08347_2.00	NN 70-40%	CisBP	GCCCTGGGCAGC	56.7% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	56.6% identity		Open · Scan
M07683_2.00	NN 70-40%	CisBP	GTGGGAAAGCCT	56.6% identity		Open · Scan
MA1601.1	NN 70-40%	JASPAR	ATGTGGGAAA	56.6% identity		Open · Scan
M07686_2.00	NN 70-40%	CisBP	TAGCTTGTTTCCAGCCAC	56.4% identity		Open · Scan
M07777_2.00	NN 70-40%	CisBP	GCCAATTTCCGTGGTGTAAAT	56.3% identity		Open · Scan
M04610_2.00	NN 70-40%	CisBP	CGGCGACGCGAACAC	56.2% identity		Open · Scan
M08267_2.00	NN 70-40%	CisBP	CAGTTTCATTTTCC	56.2% identity		Open · Scan
M08311_2.00	NN 70-40%	CisBP	CTGGAACAGAAGGGGCGA	56.1% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	55.8% identity		Open · Scan
M04465_2.00	NN 70-40%	CisBP	GTGATTCTTATCTTATCCTT	55.7% identity		Open · Scan
M07667_2.00	NN 70-40%	CisBP	CCGCACAGGCCCCCGGGCCCC	55.7% identity		Open · Scan
M08279_2.00	NN 70-40%	CisBP	CCTCCCTCC	55.7% identity		Open · Scan
M08309_2.00	NN 70-40%	CisBP	AAAAACCCCCCTGCAGAGCCCAGCCCT	55.7% identity		Open · Scan
M07581_2.00	NN 70-40%	CisBP	TCCCCTGTGCTTCTCTCCCCT	55.3% identity		Open · Scan
M07700_2.00	NN 70-40%	CisBP	ATGTTGTGAGGAAGCCCA	55.2% identity		Open · Scan
M08375_2.00	NN 70-40%	CisBP	TTCCCCATTGGCTACTGCACCGGTCCT	55.2% identity		Open · Scan
M04611_2.00	NN 70-40%	CisBP	CTTTCGGACAC	55.1% identity		Open · Scan
M08392_2.00	NN 70-40%	CisBP	CTTCACCTGCTGAGG	54.9% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	54.8% identity		Open · Scan
M07657_2.00	NN 70-40%	CisBP	CCCCTGCATGTCCCCATTTTT	54.5% identity		Open · Scan
M02896_2.00	NN 70-40%	CisBP	TGCTTTCTAGGAATTCA	54.4% identity		Open · Scan
MA0731.1	NN 70-40%	JASPAR	TGCTTTCTAGGAATTCA	54.4% identity		Open · Scan
M07605_2.00	NN 70-40%	CisBP	TATTTTTTTTTATTTTTTTTTTTTTTTTTT	53.8% identity		Open · Scan
M07598_2.00	NN 70-40%	CisBP	CTGACAATACCAAGTGTTGAC	53.7% identity		Open · Scan
M07707_2.00	NN 70-40%	CisBP	TCCCGC	53.7% identity		Open · Scan
M08291_2.00	NN 70-40%	CisBP	AATCCAGCCCTAGACTCTCCC	53.6% identity		Open · Scan
M08386_2.00	NN 70-40%	CisBP	GCCTTAAAAGCTCAGCAC	53.6% identity		Open · Scan
M05853_2.00	NN 70-40%	CisBP	CCACCTTTAGCCATATCT	53.5% identity		Open · Scan
M08901_2.00	NN 70-40%	CisBP	CCAGTTCACACC	53.5% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	53.4% identity		Open · Scan
M08399_2.00	NN 70-40%	CisBP	TACTCTGGGGCCACATGACTC	53.4% identity		Open · Scan
MA1589.1	NN 70-40%	JASPAR	TAGGAGTGGAATTGCTGGGTC	53.4% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	53.4% identity		Open · Scan
M07566_2.00	NN 70-40%	CisBP	TCAAACCATCCTTGC	53.1% identity		Open · Scan
M07684_2.00	NN 70-40%	CisBP	CCTGTTCTTGACTTT	53.1% identity		Open · Scan
M08334_2.00	NN 70-40%	CisBP	TTTGTTTTTTTCTGATTGCTTTTTACTTAT	53.1% identity		Open · Scan
M00134_2.00	NN 70-40%	CisBP	GCCACGCCCA	53.0% identity		Open · Scan
M04598_2.00	NN 70-40%	CisBP	CGCTAACTCTCCACA	53.0% identity		Open · Scan
M07691_2.00	NN 70-40%	CisBP	CCTGCAGCCACCTTGGCCTTG	53.0% identity		Open · Scan
M00945_2.00	NN 70-40%	CisBP	CACCGCAC	52.8% identity		Open · Scan
M07588_2.00	NN 70-40%	CisBP	TCCTTCCCTCTTTCC	52.7% identity		Open · Scan
M07610_2.00	NN 70-40%	CisBP	CCTTCTTCCTCCCCCCTGCCCACC	52.7% identity		Open · Scan
M07761_2.00	NN 70-40%	CisBP	CTGATTATTCACCCA	52.7% identity		Open · Scan
M08292_2.00	NN 70-40%	CisBP	TGTATTCCTTGTCATGTGTGG	52.7% identity		Open · Scan
MA1656.1	NN 70-40%	JASPAR	CCAAGCCCAACCAG	52.7% identity		Open · Scan
M08283_2.00	NN 70-40%	CisBP	GACTTTTATTTT	52.6% identity		Open · Scan
M04590_2.00	NN 70-40%	CisBP	TGCGCTAACCATTGC	52.5% identity		Open · Scan
MA0528.1	NN 70-40%	JASPAR	GGAGGAGGAGGGGGAGGAGGA	52.5% identity		Open · Scan
M07678_2.00	NN 70-40%	CisBP	CCCGCCCCCTCCTCCCCCTTCCCACCC	52.3% identity		Open · Scan
M07746_2.00	NN 70-40%	CisBP	CAGCTGGCGCCCAACATGGGTCCC	52.3% identity		Open · Scan
M04505_2.00	NN 70-40%	CisBP	AGCTTTTCCCACAC	52.0% identity		Open · Scan
M07753_2.00	NN 70-40%	CisBP	TGCATTCCTTGGCTTGTG	52.0% identity		Open · Scan
M08860_2.00	NN 70-40%	CisBP	TCTTATAAGGGCACTAATCCCATT	52.0% identity		Open · Scan
M08342_2.00	NN 70-40%	CisBP	GCTCTGCCTCCCTCT	51.9% identity		Open · Scan
M08254_2.00	NN 70-40%	CisBP	CTGCCCTGGGACTTT	51.7% identity		Open · Scan
M07660_2.00	NN 70-40%	CisBP	CCGCGCCTACCTGAGGGCGCGGGCCTGGGG	51.6% identity		Open · Scan
M00142_2.00	NN 70-40%	CisBP	GTGCTCCT	51.5% identity		Open · Scan
M07727_2.00	NN 70-40%	CisBP	CGCCGCCTCCCC	51.5% identity		Open · Scan
MA1596.1	NN 70-40%	JASPAR	GCCTCAGCCTCCCGAG	51.5% identity		Open · Scan
M07582_2.00	NN 70-40%	CisBP	TCCCTG	51.1% identity		Open · Scan
M01456_2.00	NN 70-40%	CisBP	GTGATCGGCG	51.0% identity		Open · Scan
M01474_2.00	NN 70-40%	CisBP	CGCCGATCAC	51.0% identity		Open · Scan
M04536_2.00	NN 70-40%	CisBP	ACGTAACCCGATACC	50.7% identity		Open · Scan
M07600_2.00	NN 70-40%	CisBP	GCATTAGC	50.7% identity		Open · Scan
M08357_2.00	NN 70-40%	CisBP	GAGCCTGCTACTGAGCCTGGG	50.6% identity		Open · Scan
M07712_2.00	NN 70-40%	CisBP	ACATTTTTTTAATCTAAAAAAACATTTACA	50.5% identity		Open · Scan
MA1588.1	NN 70-40%	JASPAR	GAATTCTTGGTTGAC	50.3% identity		Open · Scan
M00786_2.00	NN 70-40%	CisBP	TATATATAT	50.2% identity		Open · Scan
M07562_2.00	NN 70-40%	CisBP	GAAAAAAAC	50.2% identity		Open · Scan
M07623_2.00	NN 70-40%	CisBP	GTCTAATAGAGCTGGGCTGCA	50.2% identity		Open · Scan
M08335_2.00	NN 70-40%	CisBP	AGTCGTTGTCTG	50.1% identity		Open · Scan
M00132_2.00	NN 70-40%	CisBP	TGCTACCGTT	50.0% identity		Open · Scan
M04430_2.00	NN 70-40%	CisBP	GACCACGCCCA	50.0% identity		Open · Scan
M07567_2.00	NN 70-40%	CisBP	CCACTCCACTCA	50.0% identity		Open · Scan
M07720_2.00	NN 70-40%	CisBP	TGTGTGTGTGGGCATGTGTGTGTGCGAGT	50.0% identity		Open · Scan
M08367_2.00	NN 70-40%	CisBP	GGGGTGATGACCACTCTGGCTTCTTAC	50.0% identity		Open · Scan
MA0742.1	NN 70-40%	JASPAR	GACCACGCCCTTATT	50.0% identity		Open · Scan

ModCRE6

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
DIMER_tr_Q6P579_Q6P579_HUMAN:231:282_1llm_D_1	ModCRE	Homology model	CGGCGCGCGCCG	Region 231-282 · 1 3D model		Open · Scan
TFS_tr_Q6P579_Q6P579_HUMAN:130:283_2i13_A_1	ModCRE	Homology model	TTGAAGAACTGTGCCTAAAGC	Region 130-283 · 1 3D model		Open · Scan
TFS_tr_Q6P579_Q6P579_HUMAN:146:256_5ei9_E_1	ModCRE	Homology model	CGGGCCCCCCCCCTGGCC	Region 146-256 · 1 3D model		Open · Scan
TFS_tr_Q6P579_Q6P579_HUMAN:78:335_5v3j_E_1	ModCRE	Homology model	GTGGAGGACCCCCCCCCCCCCTGGA	Region 78-335 · 1 3D model		Open · Scan
TFS_tr_Q6P579_Q6P579_HUMAN:78:335_5v3m_C_1	ModCRE	Homology model	AACTCTTTCAACCCCCGGGCCCCGGG	Region 78-335 · 1 3D model		Open · Scan
TFS_tr_Q6P579_Q6P579_HUMAN:93:335_5wjq_D_1	ModCRE	Homology model	GGGCACACCACTCCCCCGCCCCGGGG	Region 93-335 · 1 3D model		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 335 aa

78-335

Region 78-335 6 PWM

Residues

258 aa

Domains

PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

6 active PDBs · 6 summary rows

Templates

1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

6 active PDB models 6 summary rows

Region 78-3356 models · 6 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_tr_Q6P579_Q6P579_HUMAN:231:282_1llm_D_1	1llm	231-282	View model · PDB
Predicted = Low	TFS_tr_Q6P579_Q6P579_HUMAN:130:283_2i13_A_1	2i13	130-283	View model · PDB
Predicted = Low	TFS_tr_Q6P579_Q6P579_HUMAN:146:256_5ei9_E_1	5ei9	146-256	View model · PDB
Predicted = Low	TFS_tr_Q6P579_Q6P579_HUMAN:78:335_5v3j_E_1	5v3j	78-335	View model · PDB
Predicted = Low	TFS_tr_Q6P579_Q6P579_HUMAN:78:335_5v3m_C_1	5v3m	78-335	View model · PDB
Predicted = Low	TFS_tr_Q6P579_Q6P579_HUMAN:93:335_5wjq_D_1	5wjq	93-335	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
5	5ei9	78:335	146	256	P:E · DNA:A,B	58.6% / 70.3%	100	View · PDB TFS_tr_Q6P579_Q6P579_HUMAN:146:256_5ei9_E_1
4	2i13	78:335	130	283	P:A · DNA:C,D	57.8% / 67.5%	100	View · PDB TFS_tr_Q6P579_Q6P579_HUMAN:130:283_2i13_A_1
3	5wjq	78:335	93	335	P:D · DNA:A,B	51.0% / 66.3%	86	View · PDB TFS_tr_Q6P579_Q6P579_HUMAN:93:335_5wjq_D_1
1	5v3m	78:335	78	335	P:C · DNA:A,B	49.6% / 65.9%	93	View · PDB TFS_tr_Q6P579_Q6P579_HUMAN:78:335_5v3m_C_1
2	5v3j	78:335	78	335	P:E · DNA:A,B	49.6% / 65.9%	93	View · PDB TFS_tr_Q6P579_Q6P579_HUMAN:78:335_5v3j_E_1
1	1llm	78:335	231,231	282,282	P:C,D · DNA:A,B	40.4% / 63.5%	59,61	View · PDB DIMER_tr_Q6P579_Q6P579_HUMAN:231:282_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
121-143	PF00096	Zinc finger, C2H2 type	overlaps 78-335
149-171	PF00096	Zinc finger, C2H2 type	overlaps 78-335
177-199	PF00096	Zinc finger, C2H2 type	overlaps 78-335
205-227	PF00096	Zinc finger, C2H2 type	overlaps 78-335
233-255	PF00096	Zinc finger, C2H2 type	overlaps 78-335
261-283	PF00096	Zinc finger, C2H2 type	overlaps 78-335
289-311	PF00096	Zinc finger, C2H2 type	overlaps 78-335
317-335	PF00096	Zinc finger, C2H2 type	overlaps 78-335