ModCRE DB

Transcription factor

Q6P9G9 - ZNF449

Zinc finger protein 449 (Zinc finger and SCAN domain-containing protein 19)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 518 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9
MotifPredictionSourceDNA bindingSupportLogoActions
MA1656.1 Known JASPAR CCAAGCCCAACCAG Direct PWM Open · Scan
MA1656.2 Known JASPAR AAGCCCAACC Direct PWM Open · Scan
M04560_2.00 Known CisBP CTGCTGGCTCGCGAC Direct PWM Open · Scan
M04561_2.00 Known CisBP GCGCCCAACC Direct PWM Open · Scan
M04562_2.00 Known CisBP ACGCCCAACC Direct PWM Open · Scan
M04563_2.00 Known CisBP ATGCTGGCTCGCGAC Direct PWM Open · Scan
M08344_2.00 Known CisBP CCAAGCCCAACCAGGTGTATA Direct PWM Open · Scan
M08922_2.00 Known CisBP AAGCCCAACCA Direct PWM Open · Scan
ZN449_HUMAN.H11MO.0.C Known HOCOMOCO TGGTTGGGCTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 518 aa
313-513

Region 313-513 0 PWM

Residues
201 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 313-5131 model
Actions
Predicted = Low TFS_Q6P9G9:313:513_5v3j_E_1 5v3j 313-513 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
27-113PF02023SCAN domainNo overlap with loaded model regions
323-345PF00096Zinc finger, C2H2 typeoverlaps 313-513
351-373PF00096Zinc finger, C2H2 typeoverlaps 313-513
379-401PF00096Zinc finger, C2H2 typeoverlaps 313-513
407-429PF00096Zinc finger, C2H2 typeoverlaps 313-513
435-457PF00096Zinc finger, C2H2 typeoverlaps 313-513
463-485PF00096Zinc finger, C2H2 typeoverlaps 313-513
491-513PF00096Zinc finger, C2H2 typeoverlaps 313-513