Region 242-258 3 PWM
- Residues
- 17 aa
- Domains
- PF00855 · PWWP domain
- 3D models
- 3 active PDBs · 3 summary rows
- Templates
- 5XSK, 8PC6, 8PEP
- Sources
- Predicted = Low
Transcription factor
Q6PJR5 - ZMYND11
Zinc finger MYND domain-containing protein 11
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 362 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE3
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_Q6PJR5_Q6PJR5_HUMAN:242:258_5xsk_B_1 | ModCRE | Homology model | CACCCCCG | Region 242-258 · 1 3D model | Open · Scan | |
| TFS_tr_Q6PJR5_Q6PJR5_HUMAN:242:258_8pc6_K_1 | ModCRE | Homology model | GCCGGGCG | Region 242-258 · 1 3D model | Open · Scan | |
| TFS_tr_Q6PJR5_Q6PJR5_HUMAN:242:258_8pep_K_1 | ModCRE | Homology model | CCCGGCCG | Region 242-258 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
362 aa
242-258
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
3 active PDB models
3 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 242-2583 models · 3 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_Q6PJR5_Q6PJR5_HUMAN:242:258_5xsk_B_1 | 5xsk | 242-258 | View model · PDB |
| Predicted = Low | TFS_tr_Q6PJR5_Q6PJR5_HUMAN:242:258_8pc6_K_1 | 8pc6 | 242-258 | View model · PDB |
| Predicted = Low | TFS_tr_Q6PJR5_Q6PJR5_HUMAN:242:258_8pep_K_1 | 8pep | 242-258 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 5xsk | 242:258 | 242 | 258 | P:B · DNA:D,F | 58.8% / 88.2% | 18 | View · PDB TFS_tr_Q6PJR5_Q6PJR5_HUMAN:242:258_5xsk_B_1 |
| 2 | 8pep | 242:258 | 242 | 258 | P:K · DNA:I,J | 58.8% / 88.2% | 20 | View · PDB TFS_tr_Q6PJR5_Q6PJR5_HUMAN:242:258_8pep_K_1 |
| 3 | 8pc6 | 242:258 | 242 | 258 | P:K · DNA:I,J | 58.8% / 88.2% | 20 | View · PDB TFS_tr_Q6PJR5_Q6PJR5_HUMAN:242:258_8pc6_K_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 142-201 | PF00439 | Bromodomain | No overlap with loaded model regions |
| 242-310 | PF00855 | PWWP domain | overlaps 242-258 |