ModCRE DB

Transcription factor

Q6PJU3 - TCF3

Transcription factor E2-alpha (Transcription factor 3)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 591 aa

1 Generated PWM 10 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
MA0091.1 Known JASPAR CGACCATCTGTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 591 aa
478-551

Region 478-551 0 PWM

Residues
74 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
10 active PDBs
Templates
2YPA, 2YPB, 6OD3, 6OD4, 6OD5
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
10 active PDB models
Region 478-55110 models
Actions
Predicted = Low DIMER_Q6PJU3:478:549_2ypb_B_1 2ypb 478-549 View model · PDB
Predicted = Low DIMER_Q6PJU3:479:551_2ypa_B_1 2ypa 479-551 View model · PDB
Predicted = Low DIMER_Q6PJU3:487:545_6od4_B_1 6od4 487-545 View model · PDB
Predicted = Low DIMER_Q6PJU3:487:546_6od3_A_1 6od3 487-546 View model · PDB
Predicted = Low DIMER_Q6PJU3:487:546_6od5_A_1 6od5 487-546 View model · PDB
Predicted = Low TFS_Q6PJU3:478:549_2ypb_B_1 2ypb 478-549 View model · PDB
Predicted = Low TFS_Q6PJU3:479:551_2ypa_B_1 2ypa 479-551 View model · PDB
Predicted = Low TFS_Q6PJU3:487:545_6od4_B_1 6od4 487-545 View model · PDB
Predicted = Low TFS_Q6PJU3:487:546_6od3_A_1 6od3 487-546 View model · PDB
Predicted = Low TFS_Q6PJU3:487:546_6od5_A_1 6od5 487-546 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
487-540PF00010Helix-loop-helix DNA-binding domainoverlaps 478-551