ModCRE DB

Transcription factor

Q6PJU4 - ZNF134

ZNF134 protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 494 aa

1 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M08392_2.00 Known CisBP CTTCACCTGCTGAGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 494 aa
237-490

Region 237-490 0 PWM

Residues
254 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models
Region 237-4906 models
Actions
Predicted = Low DIMER_Q6PJU4:409:460_1llm_D_1 1llm 409-460 View model · PDB
Predicted = Low TFS_Q6PJU4:237:490_5v3j_E_1 5v3j 237-490 View model · PDB
Predicted = Low TFS_Q6PJU4:237:490_5v3m_C_1 5v3m 237-490 View model · PDB
Predicted = Low TFS_Q6PJU4:237:490_5wjq_D_1 5wjq 237-490 View model · PDB
Predicted = Low TFS_Q6PJU4:243:490_7w1m_H_1 7w1m 243-490 View model · PDB
Predicted = Low TFS_Q6PJU4:252:405_2i13_A_1 2i13 252-405 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
243-265PF00096Zinc finger, C2H2 typeoverlaps 237-490
271-293PF00096Zinc finger, C2H2 typeoverlaps 237-490
299-321PF00096Zinc finger, C2H2 typeoverlaps 237-490
327-349PF00096Zinc finger, C2H2 typeoverlaps 237-490
355-377PF00096Zinc finger, C2H2 typeoverlaps 237-490
383-405PF00096Zinc finger, C2H2 typeoverlaps 237-490
411-433PF00096Zinc finger, C2H2 typeoverlaps 237-490
439-461PF00096Zinc finger, C2H2 typeoverlaps 237-490
467-489PF00096Zinc finger, C2H2 typeoverlaps 237-490