ModCRE DB

Transcription factor

Q6RFR7 - HZF30

Zinc finger protein 30

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 249 aa

155 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)150
MotifPredictionSourceDNA bindingSupportLogoActions
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 66.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 65.8% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 65.0% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 64.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 64.7% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 64.7% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 64.5% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 64.5% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 64.5% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 64.5% identity Open · Scan
M08903_2.00 NN 70-40% CisBP ATTCCATTCTATTCCATTCT 64.5% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 64.5% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 62.9% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 62.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.3% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.3% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 62.3% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 62.2% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 61.6% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 61.5% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 61.3% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 61.2% identity Open · Scan
M05847_2.00 NN 70-40% CisBP AGACCTACTATGC 61.2% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 61.2% identity Open · Scan
M07685_2.00 NN 70-40% CisBP CTTTCCAGCCAC 61.2% identity Open · Scan
M07759_2.00 NN 70-40% CisBP GGAGCGCCCCTGCCCGGC 61.2% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 61.2% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 61.2% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 61.2% identity Open · Scan
MA1585.1 NN 70-40% JASPAR ATAGTAGGTG 61.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.1% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 61.1% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 61.0% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 60.8% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 60.7% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 60.6% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 59.9% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 59.9% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 59.9% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 59.8% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 59.7% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 59.5% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 59.5% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 59.5% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 59.2% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 59.1% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 59.1% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 58.7% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 58.6% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 58.6% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 58.4% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 58.2% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 58.0% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 58.0% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 58.0% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 58.0% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 58.0% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 58.0% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 58.0% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 57.9% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 57.6% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 57.6% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 57.5% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 57.2% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 57.2% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 57.2% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 57.2% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 57.1% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 57.1% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 56.7% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 56.5% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 56.2% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 56.1% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 56.1% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 55.9% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 55.9% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 55.8% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 55.8% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 55.8% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 55.6% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 55.6% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 55.4% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 55.2% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 55.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 55.1% identity Open · Scan
M04524_2.00 NN 70-40% CisBP TAAATCACTGCATTTCACTCA 54.8% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 54.8% identity Open · Scan
M07688_2.00 NN 70-40% CisBP GAGCCCCAAGCA 54.8% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 54.8% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 54.8% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 54.8% identity Open · Scan
MA0483.1 NN 70-40% JASPAR AAATCACAGCA 54.8% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 54.5% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 54.5% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 54.3% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 54.2% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 54.2% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 54.2% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 54.1% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 54.1% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 54.0% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.0% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 54.0% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 53.9% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 53.9% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 53.8% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 53.6% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 53.4% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 53.3% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 53.3% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 53.3% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 53.0% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 53.0% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 53.0% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 53.0% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 52.9% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 52.9% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 52.8% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 52.8% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.8% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 52.6% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 52.6% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 52.4% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 52.3% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 52.2% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 52.1% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 52.1% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 52.0% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 52.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.0% identity Open · Scan
MA1514.1 NN 70-40% JASPAR CACCACGCACCCCTT 52.0% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 51.7% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 51.7% identity Open · Scan
M08358_2.00 NN 70-40% CisBP CCCTCCCCCTCC 51.6% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 51.5% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 51.2% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.2% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.1% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.9% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.7% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.3% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 50.2% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 50.2% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 50.2% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 50.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.2% identity Open · Scan
M01457_2.00 NN 70-40% CisBP GCGCACGGAC 50.0% identity Open · Scan
ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_Q6RFR7_Q6RFR7_HUMAN:104:152_1llm_C_1 ModCRE Homology model ATTGCGCCGGGA Region 104-152 · 1 3D model Open · Scan
TFS_tr_Q6RFR7_Q6RFR7_HUMAN:1:248_5v3j_E_1 ModCRE Homology model CCCCGTAGGGACGGCACTAAGTG Region 1-248 · 1 3D model Open · Scan
TFS_tr_Q6RFR7_Q6RFR7_HUMAN:1:248_5v3m_C_1 ModCRE Homology model CCCCGCGGGGGGGGGTGTGGCGGG Region 1-248 · 1 3D model Open · Scan
TFS_tr_Q6RFR7_Q6RFR7_HUMAN:1:248_5wjq_D_1 ModCRE Homology model GGGAGCCCGGTGGGACGGCTCCTCCCGC Region 1-248 · 1 3D model Open · Scan
TFS_tr_Q6RFR7_Q6RFR7_HUMAN:3:156_2i13_A_1 ModCRE Homology model GGACCTTAGTAGTGTGCTATT Region 3-156 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 249 aa
1-249

Region 1-249 5 PWM

Residues
249 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 1-2496 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q6RFR7_Q6RFR7_HUMAN:104:152_1llm_C_1 1llm 104-152 View model · PDB
Predicted = Low TFS_tr_Q6RFR7_Q6RFR7_HUMAN:1:248_5v3j_E_1 5v3j 1-248 View model · PDB
Predicted = Low TFS_tr_Q6RFR7_Q6RFR7_HUMAN:1:248_5v3m_C_1 5v3m 1-248 View model · PDB
Predicted = Low TFS_tr_Q6RFR7_Q6RFR7_HUMAN:1:248_5wjq_D_1 5wjq 1-248 View model · PDB
Predicted = Low TFS_tr_Q6RFR7_Q6RFR7_HUMAN:3:156_2i13_A_1 2i13 3-156 View model · PDB
Predicted = Low TFS_tr_Q6RFR7_Q6RFR7_HUMAN:7:249_7w1m_H_1 7w1m 7-249 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 1:249 3 156 P:A · DNA:C,D 58.4% / 66.2% 100 View · PDB TFS_tr_Q6RFR7_Q6RFR7_HUMAN:3:156_2i13_A_1
3 5wjq 1:249 1 248 P:D · DNA:A,B 50.8% / 65.7% 88 View · PDB TFS_tr_Q6RFR7_Q6RFR7_HUMAN:1:248_5wjq_D_1
1 5v3m 1:249 1 248 P:C · DNA:A,B 50.4% / 66.1% 89 View · PDB TFS_tr_Q6RFR7_Q6RFR7_HUMAN:1:248_5v3m_C_1
2 5v3j 1:249 1 248 P:E · DNA:A,B 50.4% / 66.1% 89 View · PDB TFS_tr_Q6RFR7_Q6RFR7_HUMAN:1:248_5v3j_E_1
1 1llm 1:249 104,104 152,152 P:C,D · DNA:A,B 44.9% / 65.3% 56,57 View · PDB DIMER_tr_Q6RFR7_Q6RFR7_HUMAN:104:152_1llm_C_1
5 7w1m 1:249 7 249 P:H · DNA:F,G 37.1% / 52.0% 75 View · PDB TFS_tr_Q6RFR7_Q6RFR7_HUMAN:7:249_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
22-44PF00096Zinc finger, C2H2 typeoverlaps 1-249
50-72PF00096Zinc finger, C2H2 typeoverlaps 1-249
78-100PF00096Zinc finger, C2H2 typeoverlaps 1-249
106-128PF00096Zinc finger, C2H2 typeoverlaps 1-249
134-156PF00096Zinc finger, C2H2 typeoverlaps 1-249
162-184PF00096Zinc finger, C2H2 typeoverlaps 1-249
190-212PF00096Zinc finger, C2H2 typeoverlaps 1-249
218-240PF00096Zinc finger, C2H2 typeoverlaps 1-249