ModCRE DB

Transcription factor

Q6RFS1 - HZF17

Zinc finger protein 17

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 239 aa

102 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)96
MotifPredictionSourceDNA bindingSupportLogoActions
M00944_2.00 NN 70-40% CisBP TCGCTATAA 66.6% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.4% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 65.4% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.2% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 64.2% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.0% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.0% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.0% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 62.5% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 60.4% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 60.0% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 59.9% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 59.7% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 59.5% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 59.2% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 59.2% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 59.1% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.4% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 58.2% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 58.1% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 58.1% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 58.1% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 57.7% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 57.7% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 57.4% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 57.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 57.3% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 57.2% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.6% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 55.7% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 55.6% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 55.5% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 55.2% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 55.2% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 55.2% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.9% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 54.7% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 54.6% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 54.4% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 54.4% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 54.3% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 54.3% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 54.2% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 54.2% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 53.9% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 53.9% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 53.8% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 53.7% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 53.6% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 53.6% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 53.4% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 53.3% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 53.2% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 53.2% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 53.2% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 53.1% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 53.1% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 53.1% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 52.9% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 52.9% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 52.9% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.8% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 52.7% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 52.7% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 52.7% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 52.7% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 52.6% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.5% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.4% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 52.3% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 52.3% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 52.3% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 52.1% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 51.9% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 51.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 51.7% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 51.7% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.4% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 51.3% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.3% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 51.2% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 51.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 51.1% identity Open · Scan
M01531_2.00 NN 70-40% CisBP CCCCCCCTAAAT 50.9% identity Open · Scan
M00019_2.00 NN 70-40% CisBP ACCCCTAATT 50.8% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 50.8% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 50.7% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 50.6% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 50.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 50.3% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 50.2% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 50.2% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 50.0% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 50.0% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_Q6RFS1_Q6RFS1_HUMAN:67:116_1llm_D_1 ModCRE Homology model TTCGCGCGCGGG Region 67-116 · 1 3D model Open · Scan
TFS_tr_Q6RFS1_Q6RFS1_HUMAN:1:232_5wjq_D_1 ModCRE Homology model GGGGCAGGGGGGCTGCGGGGCGATTTCC Region 1-232 · 1 3D model Open · Scan
TFS_tr_Q6RFS1_Q6RFS1_HUMAN:50:203_2i13_A_1 ModCRE Homology model AATCATAGAACACTGACTCAA Region 50-203 · 1 3D model Open · Scan
TFS_tr_Q6RFS1_Q6RFS1_HUMAN:5:238_5v3j_E_1 ModCRE Homology model TAGGGTAGCCCCCAGACCGGGAA Region 5-238 · 1 3D model Open · Scan
TFS_tr_Q6RFS1_Q6RFS1_HUMAN:5:238_5v3m_C_1 ModCRE Homology model GGGGAAATGGGGTTGGCCGGGAAA Region 5-238 · 1 3D model Open · Scan
TFS_tr_Q6RFS1_Q6RFS1_HUMAN:94:204_5ei9_E_1 ModCRE Homology model CCCCCCGGGGGGGGGCA Region 94-204 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 239 aa
1-238

Region 1-238 6 PWM

Residues
238 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 1-2386 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q6RFS1_Q6RFS1_HUMAN:67:116_1llm_D_1 1llm 67-116 View model · PDB
Predicted = Low TFS_tr_Q6RFS1_Q6RFS1_HUMAN:1:232_5wjq_D_1 5wjq 1-232 View model · PDB
Predicted = Low TFS_tr_Q6RFS1_Q6RFS1_HUMAN:50:203_2i13_A_1 2i13 50-203 View model · PDB
Predicted = Low TFS_tr_Q6RFS1_Q6RFS1_HUMAN:5:238_5v3j_E_1 5v3j 5-238 View model · PDB
Predicted = Low TFS_tr_Q6RFS1_Q6RFS1_HUMAN:5:238_5v3m_C_1 5v3m 5-238 View model · PDB
Predicted = Low TFS_tr_Q6RFS1_Q6RFS1_HUMAN:94:204_5ei9_E_1 5ei9 94-204 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 5ei9 1:238 94 204 P:E · DNA:A,B 56.8% / 68.5% 100 View · PDB TFS_tr_Q6RFS1_Q6RFS1_HUMAN:94:204_5ei9_E_1
4 2i13 1:238 50 203 P:A · DNA:C,D 55.8% / 67.5% 100 View · PDB TFS_tr_Q6RFS1_Q6RFS1_HUMAN:50:203_2i13_A_1
1 5wjq 1:238 1 232 P:D · DNA:A,B 46.4% / 63.9% 82 View · PDB TFS_tr_Q6RFS1_Q6RFS1_HUMAN:1:232_5wjq_D_1
2 5v3m 1:238 5 238 P:C · DNA:A,B 41.7% / 64.3% 84 View · PDB TFS_tr_Q6RFS1_Q6RFS1_HUMAN:5:238_5v3m_C_1
3 5v3j 1:238 5 238 P:E · DNA:A,B 41.7% / 64.3% 84 View · PDB TFS_tr_Q6RFS1_Q6RFS1_HUMAN:5:238_5v3j_E_1
1 1llm 1:238 67,67 116,116 P:C,D · DNA:A,B 40.0% / 58.0% 57,58 View · PDB DIMER_tr_Q6RFS1_Q6RFS1_HUMAN:67:116_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
69-91PF00096Zinc finger, C2H2 typeoverlaps 1-238
97-119PF00096Zinc finger, C2H2 typeoverlaps 1-238
125-147PF00096Zinc finger, C2H2 typeoverlaps 1-238
153-175PF00096Zinc finger, C2H2 typeoverlaps 1-238
181-203PF00096Zinc finger, C2H2 typeoverlaps 1-238
209-231PF00096Zinc finger, C2H2 typeoverlaps 1-238