ModCRE DB

Transcription factor

Q6VB86 - FOXD4

FOXD4

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 494 aa

46 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)6
MotifPredictionSourceDNA bindingSupportLogoActions
M10565_2.00 NN 70+% CisBP AAACAAACAATC 88.1% identity Open · Scan
MA0041.1 NN 70+% JASPAR GAATGTTTGTTT 87.8% identity Open · Scan
MA0847.1 NN 70+% JASPAR GTAAACA 84.3% identity Open · Scan
M03741_2.00 NN 70+% CisBP TTATGTAAACAAT 82.8% identity Open · Scan
MA0031.1 NN 70+% JASPAR GTAAACAT 72.1% identity Open · Scan
M10570_2.00 NN 70+% CisBP CTTAAGTAAACAATGG 71.4% identity Open · Scan
Nearest Neighbor (70% - 40%)40
MotifPredictionSourceDNA bindingSupportLogoActions
MA1487.1 NN 70-40% JASPAR CCTTAAATAAACAAT 69.6% identity Open · Scan
M00791_2.00 NN 70-40% CisBP ATGTAAACAA 65.6% identity Open · Scan
MA0613.1 NN 70-40% JASPAR GTAAACAA 65.6% identity Open · Scan
MA0846.1 NN 70-40% JASPAR TAAGTAAACAAA 65.6% identity Open · Scan
M09104_2.00 NN 70-40% CisBP CCTTGTTTACTTT 64.8% identity Open · Scan
M01983_2.00 NN 70-40% CisBP TGTTTACATA 64.2% identity Open · Scan
MA0845.1 NN 70-40% JASPAR TATGTAAATAT 64.2% identity Open · Scan
M10571_2.00 NN 70-40% CisBP AAAAATAAATATAAGG 63.6% identity Open · Scan
M01990_2.00 NN 70-40% CisBP TTGTTTACA 63.4% identity Open · Scan
M03743_2.00 NN 70-40% CisBP TATGTAAATATTTACATA 63.3% identity Open · Scan
M03034_2.00 NN 70-40% CisBP GTAAACA 62.9% identity Open · Scan
MA0148.1 NN 70-40% JASPAR TGTTTACTTTG 62.6% identity Open · Scan
MA1683.1 NN 70-40% JASPAR ATGTAAACATA 62.6% identity Open · Scan
M03735_2.00 NN 70-40% CisBP AAACAATAATATT 61.6% identity Open · Scan
MA0047.2 NN 70-40% JASPAR TGTTTACTTAGG 61.6% identity Open · Scan
MA0047.3 NN 70-40% JASPAR ATGTAAACATA 61.6% identity Open · Scan
MA0042.1 NN 70-40% JASPAR GGATGTTTGTTT 61.4% identity Open · Scan
M09669_2.00 NN 70-40% CisBP ATGTAAACACACC 61.1% identity Open · Scan
MA0047.1 NN 70-40% JASPAR CAATATTTACTT 60.6% identity Open · Scan
MA1606.1 NN 70-40% JASPAR ATGTAAACAAA 60.1% identity Open · Scan
MA0033.1 NN 70-40% JASPAR TATACATA 59.8% identity Open · Scan
M00164_2.00 NN 70-40% CisBP AATGTAAACA 59.4% identity Open · Scan
M04848_2.00 NN 70-40% CisBP AACGTCAACAC 59.2% identity Open · Scan
MA0030.1 NN 70-40% JASPAR CAAACGTAAACAAT 59.2% identity Open · Scan
MA1607.1 NN 70-40% JASPAR AATATGTAAACAAA 59.2% identity Open · Scan
M00665_2.00 NN 70-40% CisBP ATGTAAACAAA 58.1% identity Open · Scan
M04827_2.00 NN 70-40% CisBP GTAATGTAAACAA 57.9% identity Open · Scan
M03058_2.00 NN 70-40% CisBP GTAAACATAAACA 57.7% identity Open · Scan
M03046_2.00 NN 70-40% CisBP GTAAACAA 57.6% identity Open · Scan
MA0851.1 NN 70-40% JASPAR AAAAAGTAAACAAACAC 57.6% identity Open · Scan
MA0040.1 NN 70-40% JASPAR TATTGTTTATT 57.4% identity Open · Scan
M10528_2.00 NN 70-40% CisBP ATAATAATATTTTT 55.5% identity Open · Scan
MA0614.1 NN 70-40% JASPAR GTAAACAA 55.5% identity Open · Scan
M01974_2.00 NN 70-40% CisBP GTAAACAA 55.0% identity Open · Scan
M00044_2.00 NN 70-40% CisBP GGTAAACAA 52.2% identity Open · Scan
M01982_2.00 NN 70-40% CisBP TATGTAAACA 51.9% identity Open · Scan
M03012_2.00 NN 70-40% CisBP GTAAACA 51.5% identity Open · Scan
MA0852.1 NN 70-40% JASPAR AAAATGTAAACAAACAG 51.0% identity Open · Scan
MA0852.2 NN 70-40% JASPAR AATGTAAACAAGGC 51.0% identity Open · Scan
MA1103.1 NN 70-40% JASPAR ATGTAAACAAG 51.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 494 aa
104-170

Region 104-170 0 PWM

Residues
67 aa
Domains
PF00250 · Forkhead domain
3D models
1 active PDB
Templates
2A07
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 104-1701 model
Actions
Predicted = Low DIMER_Q6VB86:104:170_2a07_K_1 2a07 104-170 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
104-188PF00250Forkhead domainoverlaps 104-170