Transcription factor

Q6X7T3

HSD16

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 399 aa

72 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)67

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	66.6% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	65.4% identity		Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	64.2% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	64.2% identity		Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	64.2% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	63.0% identity		Open · Scan
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	63.0% identity		Open · Scan
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	63.0% identity		Open · Scan
M04653_2.00	NN 70-40%	CisBP	GGTACGGTTGTCCATGTTGCAA	62.5% identity		Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	61.9% identity		Open · Scan
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	61.9% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	61.9% identity		Open · Scan
M07678_2.00	NN 70-40%	CisBP	CCCGCCCCCTCCTCCCCCTTCCCACCC	61.1% identity		Open · Scan
M00764_2.00	NN 70-40%	CisBP	GTCTACAC	61.0% identity		Open · Scan
MA1124.1	NN 70-40%	JASPAR	CATTCATTCATTC	60.8% identity		Open · Scan
M08985_2.00	NN 70-40%	CisBP	TGAGGACCTACTGTGTGCC	59.8% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	59.7% identity		Open · Scan
M04650_2.00	NN 70-40%	CisBP	GCATAACTGCCCCGCTGCC	59.2% identity		Open · Scan
M07638_2.00	NN 70-40%	CisBP	TGCAGCTCCCTGCCC	59.2% identity		Open · Scan
M04613_2.00	NN 70-40%	CisBP	CTCATGTGCTAATTACAAA	58.6% identity		Open · Scan
M02924_2.00	NN 70-40%	CisBP	AGTGTTAACAGAACACCT	58.4% identity		Open · Scan
M07579_2.00	NN 70-40%	CisBP	CATCTCCAGGA	58.2% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	58.0% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	57.5% identity		Open · Scan
M07753_2.00	NN 70-40%	CisBP	TGCATTCCTTGGCTTGTG	57.4% identity		Open · Scan
M04598_2.00	NN 70-40%	CisBP	CGCTAACTCTCCACA	56.5% identity		Open · Scan
M07581_2.00	NN 70-40%	CisBP	TCCCCTGTGCTTCTCTCCCCT	56.1% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	55.8% identity		Open · Scan
M08267_2.00	NN 70-40%	CisBP	CAGTTTCATTTTCC	55.6% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	55.5% identity		Open · Scan
M08395_2.00	NN 70-40%	CisBP	GCTGCCTACTCTTCC	55.3% identity		Open · Scan
M08292_2.00	NN 70-40%	CisBP	TGTATTCCTTGTCATGTGTGG	55.2% identity		Open · Scan
M01456_2.00	NN 70-40%	CisBP	GTGATCGGCG	54.7% identity		Open · Scan
M08375_2.00	NN 70-40%	CisBP	TTCCCCATTGGCTACTGCACCGGTCCT	54.7% identity		Open · Scan
M07566_2.00	NN 70-40%	CisBP	TCAAACCATCCTTGC	54.0% identity		Open · Scan
M08255_2.00	NN 70-40%	CisBP	CTCTTCCGGT	54.0% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	54.0% identity		Open · Scan
M04475_2.00	NN 70-40%	CisBP	GATGCACGTACCGTGCCTCA	53.6% identity		Open · Scan
M08334_2.00	NN 70-40%	CisBP	TTTGTTTTTTTCTGATTGCTTTTTACTTAT	53.6% identity		Open · Scan
M00945_2.00	NN 70-40%	CisBP	CACCGCAC	53.4% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	53.3% identity		Open · Scan
M07659_2.00	NN 70-40%	CisBP	GTCTTCCAAGTAGCTGGTGTT	53.0% identity		Open · Scan
M08901_2.00	NN 70-40%	CisBP	CCAGTTCACACC	52.8% identity		Open · Scan
M07601_2.00	NN 70-40%	CisBP	CAGATGCCGGCACCATGCTTC	52.7% identity		Open · Scan
M08392_2.00	NN 70-40%	CisBP	CTTCACCTGCTGAGG	52.7% identity		Open · Scan
M04515_2.00	NN 70-40%	CisBP	TATGCTATAACAAGCAGCCCC	52.6% identity		Open · Scan
M07731_2.00	NN 70-40%	CisBP	TTTCCCAGCAGCAACAGCACCGCCCCCCCC	52.5% identity		Open · Scan
M08386_2.00	NN 70-40%	CisBP	GCCTTAAAAGCTCAGCAC	52.5% identity		Open · Scan
M08247_2.00	NN 70-40%	CisBP	AAAAATAACAAACGG	52.4% identity		Open · Scan
MA1596.1	NN 70-40%	JASPAR	GCCTCAGCCTCCCGAG	52.4% identity		Open · Scan
M08254_2.00	NN 70-40%	CisBP	CTGCCCTGGGACTTT	51.9% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	51.9% identity		Open · Scan
M08373_2.00	NN 70-40%	CisBP	CCCCCTGGCTCTTCCTCT	51.8% identity		Open · Scan
M07633_2.00	NN 70-40%	CisBP	CTCTCGTTGTGCCTTTGCCAT	51.7% identity		Open · Scan
M08357_2.00	NN 70-40%	CisBP	GAGCCTGCTACTGAGCCTGGG	51.7% identity		Open · Scan
MA1154.1	NN 70-40%	JASPAR	CTTTCCCACAACACGAC	51.7% identity		Open · Scan
M08335_2.00	NN 70-40%	CisBP	AGTCGTTGTCTG	51.3% identity		Open · Scan
MA1656.1	NN 70-40%	JASPAR	CCAAGCCCAACCAG	51.1% identity		Open · Scan
M04465_2.00	NN 70-40%	CisBP	GTGATTCTTATCTTATCCTT	51.0% identity		Open · Scan
M07587_2.00	NN 70-40%	CisBP	CCCCCTCCCCAGTCGAGCCCCCGC	51.0% identity		Open · Scan
M07588_2.00	NN 70-40%	CisBP	TCCTTCCCTCTTTCC	50.2% identity		Open · Scan
M08314_2.00	NN 70-40%	CisBP	ATTCATCAAGGTCCTCAACAATGG	50.2% identity		Open · Scan
M05844_2.00	NN 70-40%	CisBP	TCACCTGT	50.0% identity		Open · Scan
M07562_2.00	NN 70-40%	CisBP	GAAAAAAAC	50.0% identity		Open · Scan
M07770_2.00	NN 70-40%	CisBP	CTTGGACTT	50.0% identity		Open · Scan
MA0103.1	NN 70-40%	JASPAR	CACCTG	50.0% identity		Open · Scan
MA0103.2	NN 70-40%	JASPAR	CCTCACCTG	50.0% identity		Open · Scan

ModCRE5

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_tr_Q6X7T3_Q6X7T3_HUMAN:120:392_5v3j_E_1	ModCRE	Homology model	CGCAAGCCTGGGGGCGAGGACCCGGC	Region 120-392 · 1 3D model		Open · Scan
TFS_tr_Q6X7T3_Q6X7T3_HUMAN:120:392_5v3m_C_1	ModCRE	Homology model	GGGGAATGTCCCGGGCGGGGCAGCCC	Region 120-392 · 1 3D model		Open · Scan
TFS_tr_Q6X7T3_Q6X7T3_HUMAN:161:392_5wjq_D_1	ModCRE	Homology model	GGGGCAGGGGCGCTGCGCGGGGGAACCC	Region 161-392 · 1 3D model		Open · Scan
TFS_tr_Q6X7T3_Q6X7T3_HUMAN:210:363_2i13_A_1	ModCRE	Homology model	AAATATAGTAAACAGATTAAA	Region 210-363 · 1 3D model		Open · Scan
TFS_tr_Q6X7T3_Q6X7T3_HUMAN:254:364_5ei9_E_1	ModCRE	Homology model	GCCCCCCGGGGTGGGGCC	Region 254-364 · 1 3D model		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 399 aa

120-392

Region 120-392 5 PWM

Residues

273 aa

Domains

PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

6 active PDBs · 6 summary rows

Templates

1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

6 active PDB models 6 summary rows

Region 120-3926 models · 6 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_tr_Q6X7T3_Q6X7T3_HUMAN:227:276_1llm_D_1	1llm	227-276	View model · PDB
Predicted = Low	TFS_tr_Q6X7T3_Q6X7T3_HUMAN:120:392_5v3j_E_1	5v3j	120-392	View model · PDB
Predicted = Low	TFS_tr_Q6X7T3_Q6X7T3_HUMAN:120:392_5v3m_C_1	5v3m	120-392	View model · PDB
Predicted = Low	TFS_tr_Q6X7T3_Q6X7T3_HUMAN:161:392_5wjq_D_1	5wjq	161-392	View model · PDB
Predicted = Low	TFS_tr_Q6X7T3_Q6X7T3_HUMAN:210:363_2i13_A_1	2i13	210-363	View model · PDB
Predicted = Low	TFS_tr_Q6X7T3_Q6X7T3_HUMAN:254:364_5ei9_E_1	5ei9	254-364	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
5	5ei9	120:393	254	364	P:E · DNA:A,B	56.8% / 68.5%	100	View · PDB TFS_tr_Q6X7T3_Q6X7T3_HUMAN:254:364_5ei9_E_1
4	2i13	120:393	210	363	P:A · DNA:C,D	55.2% / 67.5%	100	View · PDB TFS_tr_Q6X7T3_Q6X7T3_HUMAN:210:363_2i13_A_1
1	5wjq	120:393	161	392	P:D · DNA:A,B	46.4% / 63.9%	82	View · PDB TFS_tr_Q6X7T3_Q6X7T3_HUMAN:161:392_5wjq_D_1
2	5v3m	120:393	120	392	P:C · DNA:A,B	42.2% / 56.4%	98	View · PDB TFS_tr_Q6X7T3_Q6X7T3_HUMAN:120:392_5v3m_C_1
3	5v3j	120:393	120	392	P:E · DNA:A,B	42.2% / 56.4%	98	View · PDB TFS_tr_Q6X7T3_Q6X7T3_HUMAN:120:392_5v3j_E_1
1	1llm	120:393	227,227	276,276	P:C,D · DNA:A,B	40.0% / 58.0%	57,58	View · PDB DIMER_tr_Q6X7T3_Q6X7T3_HUMAN:227:276_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
4-44	PF01352	KRAB box	No overlap with loaded model regions
201-223	PF00096	Zinc finger, C2H2 type	overlaps 120-392
229-251	PF00096	Zinc finger, C2H2 type	overlaps 120-392
257-279	PF00096	Zinc finger, C2H2 type	overlaps 120-392
285-307	PF00096	Zinc finger, C2H2 type	overlaps 120-392
313-335	PF00096	Zinc finger, C2H2 type	overlaps 120-392
341-363	PF00096	Zinc finger, C2H2 type	overlaps 120-392
369-391	PF00096	Zinc finger, C2H2 type	overlaps 120-392