ModCRE DB

Transcription factor

Q6ZMV8 - ZNF730

Putative zinc finger protein 730

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 503 aa

79 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07669_2.00 Known CisBP GGGAAGCTA Direct PWM Open · Scan
Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 75.0% identity Open · Scan
M07715_2.00 NN 70+% CisBP CCGCCGCCGCCGTGG 73.2% identity Open · Scan
M07687_2.00 NN 70+% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 70.7% identity Open · Scan
Nearest Neighbor (70% - 40%)75
MotifPredictionSourceDNA bindingSupportLogoActions
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 69.5% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 69.2% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 68.9% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 68.5% identity Open · Scan
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 67.8% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 66.6% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 65.5% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 65.4% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 65.2% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 64.6% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 62.6% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.9% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 61.9% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 61.1% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 61.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 60.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 60.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 60.7% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 60.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 59.5% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 59.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 59.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 59.5% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.4% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 58.3% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 58.2% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 57.5% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.9% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 55.9% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 55.9% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 55.6% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 55.4% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.1% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.0% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 54.6% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 54.3% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 54.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 54.0% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 53.8% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 53.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 53.4% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 53.3% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 53.3% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 53.3% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.2% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 53.1% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 53.0% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 52.8% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 52.6% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 52.4% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 52.4% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 52.4% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.1% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.1% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 52.0% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 51.9% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 51.8% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.7% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 51.4% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 51.2% identity Open · Scan
MA0162.1 NN 70-40% JASPAR TGCGTGGGCGG 51.1% identity Open · Scan
MA0162.2 NN 70-40% JASPAR CCCCCGCCCCCGCC 51.1% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 51.0% identity Open · Scan
M06112_2.00 NN 70-40% CisBP CTACTTTCACCGGGG 51.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 51.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.9% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 50.6% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 50.4% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 50.2% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.0% identity Open · Scan
M10391_2.00 NN 70-40% CisBP TACCCCACATTTATTTA 50.0% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 50.0% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 503 aa
225-503

Region 225-503 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 225-5031 model
Actions
Predicted = Low TFS_Q6ZMV8:225:503_5wjq_D_1 5wjq 225-503 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
4-44PF01352KRAB boxNo overlap with loaded model regions
228-250PF00096Zinc finger, C2H2 typeoverlaps 225-503
270-295PF13465Zinc-finger double domainoverlaps 225-503
312-334PF00096Zinc finger, C2H2 typeoverlaps 225-503
340-362PF00096Zinc finger, C2H2 typeoverlaps 225-503
372-390PF00096Zinc finger, C2H2 typeoverlaps 225-503
396-418PF00096Zinc finger, C2H2 typeoverlaps 225-503
424-446PF00096Zinc finger, C2H2 typeoverlaps 225-503
452-474PF00096Zinc finger, C2H2 typeoverlaps 225-503
480-502PF00096Zinc finger, C2H2 typeoverlaps 225-503