ModCRE DB

Transcription factor

Q6ZN06 - ZNF813

Zinc finger protein 813

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 617 aa

69 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)4
MotifPredictionSourceDNA bindingSupportLogoActions
M07701_2.00 NN 70+% CisBP CCTGGGCTAGGCCCTGGC 79.2% identity Open · Scan
M07754_2.00 NN 70+% CisBP CGCCCCCTCCCT 73.3% identity Open · Scan
M07618_2.00 NN 70+% CisBP CCTTTGGTGCTC 73.1% identity Open · Scan
M07723_2.00 NN 70+% CisBP CCGCTGCTCCCTGCT 71.7% identity Open · Scan
Nearest Neighbor (70% - 40%)65
MotifPredictionSourceDNA bindingSupportLogoActions
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 69.9% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 69.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 68.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 68.2% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 67.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 65.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 65.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 65.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 65.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M07759_2.00 NN 70-40% CisBP GGAGCGCCCCTGCCCGGC 63.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 62.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 62.3% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 61.4% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 60.1% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 59.3% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 58.9% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 58.4% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 58.3% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 57.6% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 57.2% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 57.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 56.5% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 56.3% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 56.2% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 56.2% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 55.3% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 55.3% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 55.1% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 55.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 54.9% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 54.6% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 54.5% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 54.4% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 54.2% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 53.8% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 53.6% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.5% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.5% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 53.4% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 53.4% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 52.9% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 52.9% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 52.9% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.8% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 52.2% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 52.2% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 52.2% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.1% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 52.1% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 52.0% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 51.7% identity Open · Scan
M07633_2.00 NN 70-40% CisBP CTCTCGTTGTGCCTTTGCCAT 51.7% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 51.6% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 51.2% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 51.1% identity Open · Scan
M01457_2.00 NN 70-40% CisBP GCGCACGGAC 50.9% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 50.9% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 50.8% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 50.7% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 50.6% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 617 aa
252-405

Region 252-405 0 PWM

Residues
154 aa
Domains
PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 252-4051 model
Actions
Predicted = Low TFS_Q6ZN06:252:405_2i13_A_1 2i13 252-405 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-48PF01352KRAB boxNo overlap with loaded model regions
243-265PF13912C2H2-type zinc fingeroverlaps 252-405
271-293PF00096Zinc finger, C2H2 typeoverlaps 252-405
299-321PF00096Zinc finger, C2H2 typeoverlaps 252-405
327-349PF00096Zinc finger, C2H2 typeoverlaps 252-405
355-377PF00096Zinc finger, C2H2 typeoverlaps 252-405
383-405PF00096Zinc finger, C2H2 typeoverlaps 252-405
411-433PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
439-461PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
467-489PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
523-545PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
551-573PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
579-601PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions