ModCRE DB

Transcription factor

Q6ZN08 - ZNF66

Zinc finger protein 66

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 573 aa

85 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)6
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 77.6% identity Open · Scan
M07687_2.00 NN 70+% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 77.6% identity Open · Scan
M07565_2.00 NN 70+% CisBP CCTCTGGGGGCTCGTCCA 74.5% identity Open · Scan
M07761_2.00 NN 70+% CisBP CTGATTATTCACCCA 72.3% identity Open · Scan
M07775_2.00 NN 70+% CisBP GCCGAAACCCGGG 71.0% identity Open · Scan
M08381_2.00 NN 70+% CisBP ACATTTTGTCCTCCTAGTCCT 70.2% identity Open · Scan
Nearest Neighbor (70% - 40%)79
MotifPredictionSourceDNA bindingSupportLogoActions
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 69.5% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 68.1% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 68.1% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 67.3% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 65.9% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 65.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 65.4% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 64.7% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M05847_2.00 NN 70-40% CisBP AGACCTACTATGC 63.2% identity Open · Scan
MA1585.1 NN 70-40% JASPAR ATAGTAGGTG 63.2% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 63.0% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.3% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 61.9% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 61.3% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 61.3% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 61.2% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 61.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 61.2% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 61.2% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 60.5% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 60.4% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 60.3% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 60.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 60.0% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 59.5% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 59.5% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 59.1% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 58.2% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 58.1% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 57.8% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 57.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 56.5% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 56.3% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.7% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 55.3% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 55.2% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.9% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 54.9% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 54.7% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 54.4% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 54.2% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.8% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 53.6% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.3% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.3% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 53.2% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 53.1% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 53.1% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 52.8% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 52.6% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 52.6% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 52.4% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 52.2% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 52.2% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 52.0% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 52.0% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.8% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 51.6% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 51.5% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 51.3% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 51.3% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 51.3% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 51.3% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 51.2% identity Open · Scan
M06112_2.00 NN 70-40% CisBP CTACTTTCACCGGGG 51.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.9% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.7% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 50.6% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 50.3% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.3% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 50.1% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 50.1% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 50.0% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.0% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 573 aa
200-476

Region 200-476 0 PWM

Residues
277 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 200-4761 model
Actions
Predicted = Low TFS_Q6ZN08:200:476_5v3j_E_1 5v3j 200-476 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
4-44PF01352KRAB boxNo overlap with loaded model regions
173-195PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
201-223PF00096Zinc finger, C2H2 typeoverlaps 200-476
229-251PF00096Zinc finger, C2H2 typeoverlaps 200-476
257-279PF00096Zinc finger, C2H2 typeoverlaps 200-476
285-307PF00096Zinc finger, C2H2 typeoverlaps 200-476
313-335PF00096Zinc finger, C2H2 typeoverlaps 200-476
341-363PF00096Zinc finger, C2H2 typeoverlaps 200-476
369-391PF00096Zinc finger, C2H2 typeoverlaps 200-476
397-419PF00096Zinc finger, C2H2 typeoverlaps 200-476
425-447PF00096Zinc finger, C2H2 typeoverlaps 200-476
453-475PF00096Zinc finger, C2H2 typeoverlaps 200-476
509-531PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
537-559PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions