ModCRE DB

Transcription factor

Q6ZN19 - ZNF841

Zinc finger protein 841

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 808 aa

103 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)99
MotifPredictionSourceDNA bindingSupportLogoActions
M00953_2.00 NN 70-40% CisBP ATCTATAT 68.2% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 68.2% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 66.2% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 66.2% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 66.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 65.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 65.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 64.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 63.5% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 60.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 60.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 58.2% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 57.7% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 57.5% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 57.4% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 56.8% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 56.6% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.4% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 56.3% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 55.8% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 55.7% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 55.7% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 55.7% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 55.7% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 55.7% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 55.6% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 55.4% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 55.4% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 55.4% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.4% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 55.2% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 55.1% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 54.7% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 54.6% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 54.4% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 54.4% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 54.1% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 54.1% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 54.1% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 54.0% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 54.0% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 53.9% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 53.6% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.5% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 53.5% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 53.5% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 53.5% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 53.3% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 53.2% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 53.1% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 53.1% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 52.8% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 52.6% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 52.6% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 52.6% identity Open · Scan
M00621_2.00 NN 70-40% CisBP CCCGCTGTGA 52.5% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 52.5% identity Open · Scan
M08320_2.00 NN 70-40% CisBP TTCCCTGCC 52.5% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 52.4% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 52.4% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 52.3% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 52.3% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 52.1% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 52.0% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 51.9% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.8% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 51.8% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 51.8% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 51.7% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 51.7% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 51.4% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 51.4% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.4% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 51.3% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 51.3% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 51.2% identity Open · Scan
M01042_2.00 NN 70-40% CisBP TGGGACCTGA 51.1% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 51.1% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 51.1% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 51.0% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 51.0% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 51.0% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.9% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 50.9% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 50.7% identity Open · Scan
M10303_2.00 NN 70-40% CisBP TACTGGGAATACC 50.6% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 50.3% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 50.3% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.2% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 50.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.0% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 50.0% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 50.0% identity Open · Scan
M07720_2.00 NN 70-40% CisBP TGTGTGTGTGGGCATGTGTGTGTGCGAGT 50.0% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 50.0% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 50.0% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 50.0% identity Open · Scan
ModCRE4
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q6ZN19_ZN841_HUMAN:256:532_5v3j_E_1 ModCRE Homology model CCCCCGAGGGGACCAAAAGGGCCCTC Region 256-532 · 1 3D model Open · Scan
TFS_sp_Q6ZN19_ZN841_HUMAN:256:532_5v3m_C_1 ModCRE Homology model CCCGCGAGGCGGGGGGGGGCCGCTGG Region 256-532 · 1 3D model Open · Scan
TFS_sp_Q6ZN19_ZN841_HUMAN:478:756_5wjq_D_1 ModCRE Homology model CGCCGGGGGGGGGGGGGGGAGGTGGCGG Region 478-756 · 1 3D model Open · Scan
TFS_sp_Q6ZN19_ZN841_HUMAN:602:755_2i13_A_1 ModCRE Homology model GAAAGCTTGGTGCTGCCTGGT Region 602-755 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 808 aa
227-756

Region 227-756 4 PWM

Residues
530 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 227-7566 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q6ZN19_ZN841_HUMAN:227:278_1llm_D_1 1llm 227-278 View model · PDB
Predicted = Low TFS_sp_Q6ZN19_ZN841_HUMAN:256:532_5v3j_E_1 5v3j 256-532 View model · PDB
Predicted = Low TFS_sp_Q6ZN19_ZN841_HUMAN:256:532_5v3m_C_1 5v3m 256-532 View model · PDB
Predicted = Low TFS_sp_Q6ZN19_ZN841_HUMAN:397:695_7w1m_H_1 7w1m 397-695 View model · PDB
Predicted = Low TFS_sp_Q6ZN19_ZN841_HUMAN:478:756_5wjq_D_1 5wjq 478-756 View model · PDB
Predicted = Low TFS_sp_Q6ZN19_ZN841_HUMAN:602:755_2i13_A_1 2i13 602-755 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 286:779 602 755 P:A · DNA:C,D 60.4% / 64.9% 100 View · PDB TFS_sp_Q6ZN19_ZN841_HUMAN:602:755_2i13_A_1
1 5wjq 286:779 478 756 P:D · DNA:A,B 54.8% / 68.8% 99 View · PDB TFS_sp_Q6ZN19_ZN841_HUMAN:478:756_5wjq_D_1
2 5v3m 286:779 256 532 P:C · DNA:A,B 52.7% / 66.8% 100 View · PDB TFS_sp_Q6ZN19_ZN841_HUMAN:256:532_5v3m_C_1
3 5v3j 286:779 256 532 P:E · DNA:A,B 52.7% / 66.8% 100 View · PDB TFS_sp_Q6ZN19_ZN841_HUMAN:256:532_5v3j_E_1
1 1llm 286:779 227,227 278,278 P:C,D · DNA:A,B 44.2% / 65.4% 59,61 View · PDB DIMER_sp_Q6ZN19_ZN841_HUMAN:227:278_1llm_D_1
5 7w1m 286:779 397 695 P:H · DNA:F,G 34.4% / 49.7% 92 View · PDB TFS_sp_Q6ZN19_ZN841_HUMAN:397:695_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
149-167PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
201-223PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
229-251PF00096Zinc finger, C2H2 typeoverlaps 227-756
257-279PF00096Zinc finger, C2H2 typeoverlaps 227-756
285-307PF00096Zinc finger, C2H2 typeoverlaps 227-756
313-335PF00096Zinc finger, C2H2 typeoverlaps 227-756
341-363PF00096Zinc finger, C2H2 typeoverlaps 227-756
369-391PF00096Zinc finger, C2H2 typeoverlaps 227-756
397-419PF00096Zinc finger, C2H2 typeoverlaps 227-756
425-447PF13912C2H2-type zinc fingeroverlaps 227-756
454-475PF00096Zinc finger, C2H2 typeoverlaps 227-756
481-503PF00096Zinc finger, C2H2 typeoverlaps 227-756
509-531PF00096Zinc finger, C2H2 typeoverlaps 227-756
537-559PF00096Zinc finger, C2H2 typeoverlaps 227-756
593-615PF00096Zinc finger, C2H2 typeoverlaps 227-756
621-643PF00096Zinc finger, C2H2 typeoverlaps 227-756
649-671PF00096Zinc finger, C2H2 typeoverlaps 227-756
677-699PF00096Zinc finger, C2H2 typeoverlaps 227-756
705-727PF00096Zinc finger, C2H2 typeoverlaps 227-756
733-755PF00096Zinc finger, C2H2 typeoverlaps 227-756
761-783PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions