ModCRE DB

Transcription factor

Q6ZNA0

cDNA FLJ16290 fis, clone OCBBF2019684, highly similar to ZINC FINGER PROTEIN 29

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 464 aa

129 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)8
MotifPredictionSourceDNA bindingSupportLogoActions
M00960_2.00 NN 70+% CisBP TGCATCCC 73.8% identity Open · Scan
M00943_2.00 NN 70+% CisBP CCCGCTGC 72.9% identity Open · Scan
M00958_2.00 NN 70+% CisBP CGGCATCCC 72.9% identity Open · Scan
M00948_2.00 NN 70+% CisBP GCAGCACC 71.7% identity Open · Scan
M00952_2.00 NN 70+% CisBP GGATGCTC 71.7% identity Open · Scan
M00953_2.00 NN 70+% CisBP ATCTATAT 71.7% identity Open · Scan
M00950_2.00 NN 70+% CisBP GCAGCCCA 70.5% identity Open · Scan
M00959_2.00 NN 70+% CisBP GCCCTCCC 70.5% identity Open · Scan
Nearest Neighbor (70% - 40%)121
MotifPredictionSourceDNA bindingSupportLogoActions
M00944_2.00 NN 70-40% CisBP TCGCTATAA 69.4% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 66.6% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 63.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 62.0% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 61.9% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 61.9% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 61.0% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 60.7% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 60.0% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 59.8% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 59.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 59.3% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 59.2% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 58.7% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 58.7% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 58.6% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 58.6% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 58.6% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 58.6% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 58.5% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 58.4% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 58.3% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 58.2% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 58.2% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 58.0% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 58.0% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 57.9% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 57.8% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 57.7% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 57.3% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 57.2% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 57.1% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 57.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.9% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 56.7% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 56.6% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 56.5% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 56.5% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 56.2% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 56.2% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 56.1% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 55.8% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 55.6% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.5% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 55.5% identity Open · Scan
M07666_2.00 NN 70-40% CisBP ATCTAGCCCCTGCCTACC 55.4% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 55.2% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 55.1% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 55.1% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 55.1% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 55.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 54.9% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 54.9% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 54.8% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 54.8% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 54.6% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.6% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 54.5% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 54.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 54.4% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 54.2% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 54.1% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 53.9% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 53.9% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 53.9% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 53.8% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 53.7% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.6% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 53.6% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 53.6% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 53.5% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 53.5% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 53.5% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 53.2% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 53.1% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 53.1% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 53.1% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 53.0% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 52.9% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 52.9% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 52.9% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 52.8% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 52.8% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.7% identity Open · Scan
M07688_2.00 NN 70-40% CisBP GAGCCCCAAGCA 52.7% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 52.5% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 52.5% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 52.4% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 52.3% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 52.3% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 52.2% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 52.1% identity Open · Scan
M08528_2.00 NN 70-40% CisBP ACCCCACTTTTTTG 51.8% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 51.7% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 51.6% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 51.4% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 51.4% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 51.4% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 51.2% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 51.0% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.8% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 50.8% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 50.8% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 50.7% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 50.5% identity Open · Scan
M07679_2.00 NN 70-40% CisBP TGCGATCTC 50.4% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 50.1% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.1% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 50.0% identity Open · Scan
M03663_2.00 NN 70-40% CisBP TTTAACCCTTTC 50.0% identity Open · Scan
M03702_2.00 NN 70-40% CisBP GACCCCCCACGACGC 50.0% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 50.0% identity Open · Scan
M06072_2.00 NN 70-40% CisBP CCACGCCCACGCAC 50.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 50.0% identity Open · Scan
M07685_2.00 NN 70-40% CisBP CTTTCCAGCCAC 50.0% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 50.0% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 50.0% identity Open · Scan
MA0733.1 NN 70-40% JASPAR TTACGCCCACGCATTT 50.0% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 50.0% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 464 aa
100-375

Region 100-375 0 PWM

Residues
276 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 100-3751 model
Actions
Predicted = Low TFS_Q6ZNA0:100:375_5v3j_E_1 5v3j 100-375 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
72-94PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
100-122PF00096Zinc finger, C2H2 typeoverlaps 100-375
128-150PF00096Zinc finger, C2H2 typeoverlaps 100-375
156-178PF00096Zinc finger, C2H2 typeoverlaps 100-375
184-206PF00096Zinc finger, C2H2 typeoverlaps 100-375
212-234PF00096Zinc finger, C2H2 typeoverlaps 100-375
240-262PF00096Zinc finger, C2H2 typeoverlaps 100-375
268-290PF00096Zinc finger, C2H2 typeoverlaps 100-375
296-318PF00096Zinc finger, C2H2 typeoverlaps 100-375
324-346PF00096Zinc finger, C2H2 typeoverlaps 100-375
352-374PF00096Zinc finger, C2H2 typeoverlaps 100-375
380-402PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
408-430PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
436-458PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions